Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0417 |
Symbol | |
ID | 4277749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 453935 |
End bp | 454831 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638133170 |
Product | putative acyltransferase |
Protein accession | YP_749117 |
Protein GI | 114561604 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.124497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTGC TTTCGAAAAT CAAAGGTTCA ATCGCATTCT TATGCTATTT ATTTAATACC ATTTTTTGGA CCATCCCTAT CTTGGCGTTC AGTATTGTTA AATTGATCCC GATTGGCATT TGTCAAAAAA TCTGTAGCTA TATTCTCGAT AATTGCGCTA CGGCATGGAT CAGTGTCAAT ACGATAGTAG AATCTATTTT TCATCCAATG CGTATTCATG TCACAGGCGA TCAATCTTTT TCTGAACAAG AATGGTATAT GGTTATTGCT AACCATCAAT CATGGGTCGA CATCCTCATT TTACAGCGAG TATTTAACCG CAAAATTCCC TTTTTAAAGT TTTTCCTCAA ACAAGAACTT ATTTTTGTCC CGGTACTCGG CCTCGCTTGG TGGGCATTAG ACTTTCCATT TATGCGCCGT TACAGCACAT CACAGTTACG AAAAAATCCC AAGTTGAAGG GTAAAGATAT TGAAATTACT CGCAAAGCCT GTGAGAAATT TAAAACGAAA CCTGTGAGTA TTATGAACTT TGTTGAAGGT ACACGTTTTA CGGAAGCTAA ACATGATAAA CAAGGGTCAC CTTTTCAGCA CCTTTTAAAA CCTAAGGCTG GAGGAATGGC ATTCGCACTT TCTGCTATGG GAGAGCACAT TAATAAACTG GTTAATGTCA CCATATATTA TCCTGATACC GTACCGACTT ATTGGCACTA TATTTGTGGT GGATTATCCG AAGTAAGAGT GGACATTAAA ATCACTGATA TCCCTCAGCG TATGCGTGGC GATTATCTGA AAGATCGCGA ATTTAAAATT GAGTTTCAAG AGCAGCTCAA TCAAATATGG CTAGAAAAAG ACCTGCAATT ACAGAATTTT GCTTCACAAG CAAAACAAGA GGATTAA
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Protein sequence | MSLLSKIKGS IAFLCYLFNT IFWTIPILAF SIVKLIPIGI CQKICSYILD NCATAWISVN TIVESIFHPM RIHVTGDQSF SEQEWYMVIA NHQSWVDILI LQRVFNRKIP FLKFFLKQEL IFVPVLGLAW WALDFPFMRR YSTSQLRKNP KLKGKDIEIT RKACEKFKTK PVSIMNFVEG TRFTEAKHDK QGSPFQHLLK PKAGGMAFAL SAMGEHINKL VNVTIYYPDT VPTYWHYICG GLSEVRVDIK ITDIPQRMRG DYLKDREFKI EFQEQLNQIW LEKDLQLQNF ASQAKQED
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