| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0391 |
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| Symbol | |
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| ID | 4278231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 421132 |
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| End bp | 423270 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133145 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_749092 |
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| Protein GI | 114561579 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.196206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTGA ACGTGATCAA TCTTGGGATA TTAAGTCTGC TGTTACCTGT ACTGAGTGTC
AGTGCGAACG AGAAAGCGGC CGACGTTGAT TTGACTGAGT CGATTGAGAA AATAACCGTA
ATGGGGCGGG CACAAACCTT TTATCGTGAA TCTTCTACGT CCGTGGGTGC CAAAGTTGAA
ACCGATATTA TGGATTTACC GCAATCGGTG CAGGTGTTGA ATGAGCAGTT GATTGTTGAT
CAAGCCGCAC GTGAAATTAC TGACTTATAC CGCTCTATAG CAGGAGTGAG CATTTACAGT
TATTCAGGTG TGACCTTTCG TGGTTTTCGT GATGACAGCA ATGTGTTTTA TGACGGTGTA
AGAGGCGACC CTTTTTCTGG TTTTGGTGTA CCACAGTTAT TTAATATTGA GCGAGTTGAA
GTGTTAAAAG GTCCTGCCGC TGCGTTATAT GGTGGTGGTG AGCCTGGCGG GATGATTAAT
TATGTCAGTA AAAAACCGAG TTTTGTCCAA AATACTGAAG TGACATTAAC CACAGGTGAT
AACGACCGTA TGGGCGGGTC AATTGATTCT AAAGGTGGTT TAACGGATTC AATTGCTTAT
CGTTTAGGCG GTTTTTATGA ACAAAAAGAC AGTTTTCGAA ATAATGCCGA CTCTGAAAAT
ACCGAATTAA CAGGTGGATT ATTATTTCAA CTTGGCGATG ACACCACGCT CACAACAACG
ATTGATTACA TCAAACAAGA CTTAGGTGGT AATCGTTTAC GGGGTGTACC CGTTGACGAT
GATGGTAATT TTTTAGTTGA TCCAAGCTAT AACGCAAATG AAAAATCCGA CTATCAAAAC
TTAGAGGCAA CTGTGCTTCA AGCGGAATTA AAACACTTTT TCAATGATGA TTTGAGCGTG
AATACCACGG TTCGCTATCT CGATAATGAA CGCGAGCAAG CCTACCATGA GTCCAGAAGT
TGGGCTGATG TTAATGGTGA CGGTGTGGCC AATATTGACG ATAAAACCAT TAAGCGTGAA
TACCGCAAAC AATACCGAGC CAACAAAGAG ATAAGCGCAA CATCTGATTT TGTCTATCGT
TTATCTTCTG GCAGCATTGA TCAAACTTTG TTATTTGGTG CTGATTATCA TCATGTTGAT
TCTGACTACG ATTATTGGTT TGCACGTTAT GAAGCTGATG GGATTAAAAA TTTGAATATT
TTTGATCTTA ATTATGGTGA AACCGATCCT TCAACTTATT CACTGACAGA CCAAAATCGT
GATGGTGCAA AAACCGAACG CCTTGGTTTA TATGCTCAGG ACCAAATAGC ATTAACTGAA
CAATGGTTGT TAATGGTGGG ATTACGTTAC GACCATTTTG ATGATTTTGA TAAAGAAACC
GGTTTTGAAT ATAACGATAA TCACGTATCG CCACGCGCAG GTATTGTGTA TAAGTTTTCA
CCAGATCAGT CGTTTTATAT TAATTATGCC GAAAGCTTTA ACCCGACATC GATTGGCGAC
CAAGATACGG CAAGTGCTGA TGGTGGCTTA TTACCTGAAG TTGGTAAACA GATAGAACTT
GGGGTTAAAA GTCAGTGGTT TGATGGCAGC GTAATGACCA CAGTAGCGGT TTATCAAATT
GATAAAAAAG ATGTTGCAAT GAACAATCCC AATTATACCG ATGGCAGCAA TGGTGCTCCA
GCGTTGGTCA GTCTTGGGCA AGTTGAAAGT AACGGTGCTG AATTTACGCT AACAGGGGAT
ATTACGGAAA ATTGGACCGT TATGGCCAAC TATGCTTATA ACGATACCCG AGTTACTGAA
GGCGATGTGG GTGACACTTA TGCCGACGGC AGTAAGTTTA TCAATGCGCC GCGCCATCAA
GCAGGTTTGT GGACTCGTTA CGATATTGAC AGTTTGAACT CAGCCATTGC GTTTGGGGCC
GATTATGTCA GTGAGCAAAT GAGTGGCGGT GCGCAACGTG TTAAGCCATT TACCGTATTT
GATATGAGCT GGACCACGAC ATGGCAAGAG ACACAATTTC AATTAAACGT GAAAAACTTG
TTTGATAAAG AATATGCCGT GAGTGGTTTT TCTGAGCGTA ATGGTCATTT TCCTGGTGCG
CCAAGAGAAA TGGTATTACA GGTATCGCAT CACTTTTAA
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| Protein sequence | MHLNVINLGI LSLLLPVLSV SANEKAADVD LTESIEKITV MGRAQTFYRE SSTSVGAKVE
TDIMDLPQSV QVLNEQLIVD QAAREITDLY RSIAGVSIYS YSGVTFRGFR DDSNVFYDGV
RGDPFSGFGV PQLFNIERVE VLKGPAAALY GGGEPGGMIN YVSKKPSFVQ NTEVTLTTGD
NDRMGGSIDS KGGLTDSIAY RLGGFYEQKD SFRNNADSEN TELTGGLLFQ LGDDTTLTTT
IDYIKQDLGG NRLRGVPVDD DGNFLVDPSY NANEKSDYQN LEATVLQAEL KHFFNDDLSV
NTTVRYLDNE REQAYHESRS WADVNGDGVA NIDDKTIKRE YRKQYRANKE ISATSDFVYR
LSSGSIDQTL LFGADYHHVD SDYDYWFARY EADGIKNLNI FDLNYGETDP STYSLTDQNR
DGAKTERLGL YAQDQIALTE QWLLMVGLRY DHFDDFDKET GFEYNDNHVS PRAGIVYKFS
PDQSFYINYA ESFNPTSIGD QDTASADGGL LPEVGKQIEL GVKSQWFDGS VMTTVAVYQI
DKKDVAMNNP NYTDGSNGAP ALVSLGQVES NGAEFTLTGD ITENWTVMAN YAYNDTRVTE
GDVGDTYADG SKFINAPRHQ AGLWTRYDID SLNSAIAFGA DYVSEQMSGG AQRVKPFTVF
DMSWTTTWQE TQFQLNVKNL FDKEYAVSGF SERNGHFPGA PREMVLQVSH HF
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