| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0357 |
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| Symbol | |
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| ID | 4277601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 385696 |
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| End bp | 386304 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133111 |
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| Product | two component transcriptional regulator, LuxR family protein |
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| Protein accession | YP_749058 |
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| Protein GI | 114561545 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC TATTAGCCGA AGATCAAGCT ATGGTAAGAG GCGCCCTCGC CGCGTTGCTC
ACATTAGCGT GTGATAGCCT AAATGAAATA GAGATTGTCG AAGTCGAAGA CGGCGATAAA
GCGATGCAAC AACTTAAAAC AGATTCATTT GACCTGTTAC TTACCGACAT TGAAATGCCG
GGTAAGTCAG GTTTAGAGCT GAGCCAATGG TTACAACAAC AGCGCAGCCA GACCAAAGTG
ATTATTTTGA CCACCTTTGG CCGAGCCGGT TATATCAAAC GAGCATTAGA ATACGGTGTC
GGTGGTTTTT TATTAAAAGA CGCACCGTCT GAAGACTTAA TTAATGCGAT TAAACAAGTG
ATGGCGGGTA AACGAGTTAT CGATCCAGAA TTAGCCTTCA CCGCTATTGG TGAAATAGAT
CCTCTCAACG ACAAAGAAAG ACGTGCATTG CGCCTAGCAA GCGAAGGCTT ATCAACTAGC
GATATTGCCA GTCAGTTGTT TATTGCAGAA GGCACAGTAC GAAACTATTT GTCAGAAGCC
ATTAGTAAAC TCAATGCCAG TAACCGAATT GATGCAGCCA GAATAGCCAA GCAAAAGGGT
TGGTTGTAA
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| Protein sequence | MKILLAEDQA MVRGALAALL TLACDSLNEI EIVEVEDGDK AMQQLKTDSF DLLLTDIEMP
GKSGLELSQW LQQQRSQTKV IILTTFGRAG YIKRALEYGV GGFLLKDAPS EDLINAIKQV
MAGKRVIDPE LAFTAIGEID PLNDKERRAL RLASEGLSTS DIASQLFIAE GTVRNYLSEA
ISKLNASNRI DAARIAKQKG WL
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