Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0356 |
Symbol | |
ID | 4277600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 383480 |
End bp | 385597 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638133110 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_749057 |
Protein GI | 114561544 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTTTA CATCTTTAAC AATCAATTTA GGTGAGCACA ATTTGCTACG ACTGGATCTT GTTCCGATCA CCGACCTTAA AGGCGTTGCT AAAAAGGTTG CGGAAAAACT GGCTAAGTTA GGTATTAAAA CAGTACAAGA CGTACTGTTT CATTTACCGC TGCGTTATGA AGACCGTACG CAAATCCATC CTATTGCCGC ATTACCTCCT GGCAGTTTTG GCACCATCGA AGCAGAAATT CAGTCGACTC AAATCATGCA AGGTCGGCGG CGCATGTTAG TGTGTAATGT GCACGATCAC AGCGGAATGA TGAGCCTGCG ATTTTTTAAT TTTTCTATGG CACAACGTAA CGCCATGGAA AATGGAGCCA GCATTCGGGC TTACGGTGAA ATACGCCGCG GCAATCATCA TAAAGAAATT GTTCACCCGG AATATCAAAT TATTCATCCT GGTGAATCCG TCACATTAAG CGACACGCTG ACGCCTATTT ACCCGACAAC AGAAGGGGTA AAACAAGCCA GTTGGATAAA ATTGACCGAG CAAGCCTTGG CAATGTTAGA CCAAGGTGGA TTACCCGAGT TACTTCCCAG TGCATTACAA CCAAACAATA TTAGCCTGCG TGATGCGCTG CATATTTTGC ACCGTCCCCA TAGCTCGGTG TCTCCTTTTG AATTAGAGCA AGGTCAACAC CCTGCACAGC AAAGATTAAT CCAAGAAGAA CTGCTGGCTC ATAATTTGAG CATGTTGCAA CTGCGCCAGC GCAGTAATCA AGATGCCGCA GTGCCAATGC CTGCTACAGG ACAATTGTTA AGCCCTTTTT TAGCGCAACT GCCCTTTAAG CCAACGGGAG CACAACAAAG AGTTGTCGCC GAAATCAACC AAGATCTTCA GCATCCAACC CCCATGATGC GTTTAGTTCA AGGCGACGTA GGTTCAGGTA AAACCTTGGT GGCGGCACTG GCGGCATTAC AAGCAATTGA AAACGGTTAC CAAGTAGCCA TGATGGCCCC TACTGAATTA TTGGCTGAAC AGCACGCAGC TAATTTTGCT ACTTGGTTTG AACCACTTGG GCTAAAAGTC GGCTGGCTGG CTGGTAAACT AAAAGGCAAA GCGCGAATTC AATCACTCGA AGATATCGCT TCTGGCGCAG CACAAATGGT CATTGGTACT CATGCGATAT TTCAACAGGC GGTAGTGTTT AACAAGCTGG CTTTAATCAT TATTGACGAA CAACATCGTT TTGGCGTTCA TCAACGCTTA GGGTTACGAG AAAAAGGCGT CAGCCAAGGT TTTCATCCAC ACCAGTTAAT CATGACAGCC ACTCCTATCC CACGAACTTT AGCCATGACA GCTTATGCCG ATTTAGACAC CTCTGTCATT GACGAGCTTC CTCCAGGACG TACACCGGTC ACAACGGTTG CGATTGCCGA TACCCGTCGT GAGCAAGTTA TTGAGCGAGT TAAACAAGCA GCTTTACATG ATAATCGCCA AGCTTATTGG GTATGTACCT TAATTGAAGA ATCTGAGGTG CTTGAATGCC AAGCTGCTGA AGACACAGCA GCAGAACTCA CCATAGCACT ACCCGAGCTC AAAATTGGCT TAATCCATGG GCGAATGAAA AGTGCTGAAA AACAGACGAT TATGGCGCAA TTTAAAGCGG GAGAGTTGAA CTTATTAGTC GCGACTACCG TCATAGAAGT CGGTGTAGAC GTACCCAATG CCAGTTTAAT GATAATCGAA AACCCTGAAC GATTAGGCCT TGCACAGTTG CACCAATTAA GAGGCCGAGT CGGCCGAGGT GCTGTTGCGA GCCATTGTGT ATTACTTTAT AAAGCGCCAT TGTCACAAAC TGCCACAAAA CGTTTAGGTG TGCTGCGCAA CAGCAATGAT GGCTTTGTAA TTGCTCAGAA AGACTTAGAA ATTAGAGGAC CAGGCGAAGT GCTTGGCACC AAGCAAACCG GTTTGGCAGA TCTTAAAATC GCTGATCTTA TCCGTGATCA ACATTTAATT GCACCAACCC AAAAATTGGC ATCACACGTT TACCAGCAAG TGCCTCAAAA CGTAGATGCT ATCATTCAAC GCTGGATAGG TGATAGACAG CAATATGTCC AAGCTTAA
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Protein sequence | MVFTSLTINL GEHNLLRLDL VPITDLKGVA KKVAEKLAKL GIKTVQDVLF HLPLRYEDRT QIHPIAALPP GSFGTIEAEI QSTQIMQGRR RMLVCNVHDH SGMMSLRFFN FSMAQRNAME NGASIRAYGE IRRGNHHKEI VHPEYQIIHP GESVTLSDTL TPIYPTTEGV KQASWIKLTE QALAMLDQGG LPELLPSALQ PNNISLRDAL HILHRPHSSV SPFELEQGQH PAQQRLIQEE LLAHNLSMLQ LRQRSNQDAA VPMPATGQLL SPFLAQLPFK PTGAQQRVVA EINQDLQHPT PMMRLVQGDV GSGKTLVAAL AALQAIENGY QVAMMAPTEL LAEQHAANFA TWFEPLGLKV GWLAGKLKGK ARIQSLEDIA SGAAQMVIGT HAIFQQAVVF NKLALIIIDE QHRFGVHQRL GLREKGVSQG FHPHQLIMTA TPIPRTLAMT AYADLDTSVI DELPPGRTPV TTVAIADTRR EQVIERVKQA ALHDNRQAYW VCTLIEESEV LECQAAEDTA AELTIALPEL KIGLIHGRMK SAEKQTIMAQ FKAGELNLLV ATTVIEVGVD VPNASLMIIE NPERLGLAQL HQLRGRVGRG AVASHCVLLY KAPLSQTATK RLGVLRNSND GFVIAQKDLE IRGPGEVLGT KQTGLADLKI ADLIRDQHLI APTQKLASHV YQQVPQNVDA IIQRWIGDRQ QYVQA
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