| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0331 |
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| Symbol | rbn |
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| ID | 4277418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 359737 |
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| End bp | 360699 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133085 |
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| Product | ribonuclease BN |
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| Protein accession | YP_749032 |
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| Protein GI | 114561519 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.533981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCAAAA AGTTTGATTA CAGCCCTATT GCGGCTTTTT TTAGTGGGAT TTGGCAGTTT
CTACTCCATC TCAAACAGCG GCTTGCTGAA GACCAAATCA ATATACGAGC GGGTCATTTG
GCCTATGTGA CTTTGTTGTC ACTGGTGCCT ATGTTGGCTG TCACCATGTC GATGTTATCG
GCCTTTCCGG TGTTTAAAGG TATTCGCGGC AATATCGAAG GCTTTATTTA TAATAATTTT
ATACCTGCGG CGGGTGATAC GGTACAAGTG CATATTAACG AATTTGTCGC TAATGCATCT
AAAGGCACTT TTGTCGGTAT TATCGCCTTA GTGTTTGTTG CCATTATGCT GATTTCAGCT
ATCGACAAAG CATTGAATAA CATTTGGCGG ATTACCGAAA AACGCTCATA CGTGGTGTCA
TTTTCGATGT ACTGGATGGT GTTGACTCTG GGGCCTGTTC TCATAGGTGC AAGCTTAGTA
GCAACGTCCT ATGTTGTGTC ATTAGAGGTT GTGGCAGGTA CTGAATTATC TGGACTAGTC
CCGTGGATTG TTGAACGTTT GCCGTTGATA TTTTCTGCAG CATCGATATT ACTGTTGTAT
ATGGTAGTAC CAAATAAGAA AGTGCATTTC TTGCATGCTT TATTAGGCGC AATTGTTGCT
GCGGTATTAT TTGAAGCAGG TAAAAAAGGT TTTGCGTTTT ATGTCACTCA GTTTCCGAGT
TATGAAGCCA TTTATGGCGC TCTGGCAGTG GTGCCCATTT TGTTTGTATG GGTATATTTA
TCGTGGATGA TTGTGTTGTT AGGGGCAGAA ATTACTGCCG CTTTACCAGA GTATCTGGAG
AGTTTGGCTG TTATAGCGGA AGATCTAAAA GCGGAAATAT TTGCTGAAAC GGAAGACGAG
CATGTCAACA ATGTGCATGA TCCTATCGTG GTTGATAAAT CGGTTCCGTC TGATAAATCA
TAA
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| Protein sequence | MPKKFDYSPI AAFFSGIWQF LLHLKQRLAE DQINIRAGHL AYVTLLSLVP MLAVTMSMLS
AFPVFKGIRG NIEGFIYNNF IPAAGDTVQV HINEFVANAS KGTFVGIIAL VFVAIMLISA
IDKALNNIWR ITEKRSYVVS FSMYWMVLTL GPVLIGASLV ATSYVVSLEV VAGTELSGLV
PWIVERLPLI FSAASILLLY MVVPNKKVHF LHALLGAIVA AVLFEAGKKG FAFYVTQFPS
YEAIYGALAV VPILFVWVYL SWMIVLLGAE ITAALPEYLE SLAVIAEDLK AEIFAETEDE
HVNNVHDPIV VDKSVPSDKS
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