| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0327 |
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| Symbol | |
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| ID | 4277414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 357379 |
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| End bp | 357918 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133081 |
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| Product | methylation site containing protein |
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| Protein accession | YP_749028 |
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| Protein GI | 114561515 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0267191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATACATA CAAGCTCATT TAATCATGGT CGTTTGTCGT GGCGTAAGCA GCAAGGTTTT
AGCTTAATAG AACTTGTGGT AGTGATTATT ATTTTAGGCA TCCTTGCTGT TGTGGTTGCT
CCAAAATTTA TCGGTTTAAA AAGTAATGCT TACGCGAGTA GTATGCAGGG CGTTGCAGCA
GCAATTAATA GCGGTAAAAT CTTGGTTTAT TCTGCTTGCG TGATAAGTGC AGGTTGCGAT
GAAACAGCCC CTGGGACCAG TAATGGTTTG GGCAATAGTA TTATGGTACA AGGCCAATCA
GTAACGTTAG CTTACGGATA TCCGCGTCAT ACTTCAGCCG GTATCGTTAG AATGATTAAC
ATTGCCGACA ACAGTGGCGG TGGTGAATTT AACATCACAA CCTATGATGT TAATAATCGA
AGCGGATTAC GTATTCGTCC AAATGCAGAT TATGCTGCCA ATAAATGCGA AATTAGATAT
TCGCAACCAC AAGCCGCAGG AGAGTCACCG TTAGTTGTTG TCGATATTGA CGAGTGTTAA
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| Protein sequence | MIHTSSFNHG RLSWRKQQGF SLIELVVVII ILGILAVVVA PKFIGLKSNA YASSMQGVAA
AINSGKILVY SACVISAGCD ETAPGTSNGL GNSIMVQGQS VTLAYGYPRH TSAGIVRMIN
IADNSGGGEF NITTYDVNNR SGLRIRPNAD YAANKCEIRY SQPQAAGESP LVVVDIDEC
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