| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0296 |
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| Symbol | |
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| ID | 4278571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 325730 |
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| End bp | 326713 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133050 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_748997 |
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| Protein GI | 114561484 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.35272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAG ACAACCTTGC TCGAATCGAT CTTAATCTAT TAGTCATTCT ACAGGTATTA
CTTGAGGAGC AAAGCGTCAC TCGGGCTGCC CATCGCTTGC ATGTGAGTCA ATCTGCTGTC
AGTAAAAGCT TAAATCGGTT GCGAGAAACA CTAGACGATC CACTGTTTCA ACGCACAGCA
CACGGCTTAA AACCAACCGC ACATGCTGAT GCATTAAGAC AACAACTGCC GTTAGTATTA
CAAAACTTGT ATAAGCTCAC GCAACCGCCA AATTTTCATC CGGCGACGAG TAACCGCCAA
TTTTCATTCT CGATGGTCGA AAGTGCTTAT GAAACCTTAA TACCCTATTT TATCGGACCA
TTATTACAAC AGGCACCGTT AATAAAATTA GATTCCTATG TTTGGACCGA AAAATCCATG
CAAGACCTAC AGCAAGGACA AATAGATTTT GGCATTGCAG GTCGAGATAT TCTGCCTCAA
ACCGATGTCA ATATTGACAA AGTACCTGAA GGTATCGAAT CGCAAATATT ATTTAACGAC
CATCAAGTTT GCTTAGTGCG TAAAAATCAT CCTATTTTAC AAGCTGTAAA AGATGGTCGC
TGGGATCAAG CTCACTACCT TAACATGTCT CATGTACAGG TAAGATGTGA AGGTAACGAT
TGGTGGGCAC TAGATTACCA CTTAGCCAAC TTAGGCTTAC ACCGTAACCT ATCGACAACT
GTGCCAGACT TTTATGGTGC TGCCAGTGTT TGTGCCCATA CCGATTTAAT TTTTACCTTG
CCCTCTAGCT TTGCTAACCA TGCACAAAAA TTATATTCGC TGGTGTCCAT TCCCTTACCT
TTTGAATTTA TGCCGATGGC GTATGTTTTC TTATGGCATG AACGAAATAA TCAAGAACCT
GGGCATCAAT GGTTTCGCAA TATTATTTTC AGCAGCGTCG ATAAAGCCAT AGCGAACCAA
CATATTAGTA AACCCAATAA CTGA
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| Protein sequence | MNLDNLARID LNLLVILQVL LEEQSVTRAA HRLHVSQSAV SKSLNRLRET LDDPLFQRTA
HGLKPTAHAD ALRQQLPLVL QNLYKLTQPP NFHPATSNRQ FSFSMVESAY ETLIPYFIGP
LLQQAPLIKL DSYVWTEKSM QDLQQGQIDF GIAGRDILPQ TDVNIDKVPE GIESQILFND
HQVCLVRKNH PILQAVKDGR WDQAHYLNMS HVQVRCEGND WWALDYHLAN LGLHRNLSTT
VPDFYGAASV CAHTDLIFTL PSSFANHAQK LYSLVSIPLP FEFMPMAYVF LWHERNNQEP
GHQWFRNIIF SSVDKAIANQ HISKPNN
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