| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0293 |
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| Symbol | |
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| ID | 4278568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 323577 |
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| End bp | 324215 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133047 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_748994 |
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| Protein GI | 114561481 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.572416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAGA CACTCATTTT AGGCGCAAGC GGACAGATCG GTAACATGGC GACAAAGCAG
CTATTAGCAG ATGGCCAATC AGTCATAGCA TTAGTGCGAG ATAAAAATAA ATTGGCTGAT
ATCGCCAGTG ATAAGAAGCT AGACATAGTT GAAGCGGATT TAGAACAGGA CTTTAGCCAA
GCATTTAACG ATTGCGATCA GGTCATTTTT AGCGCTGGAT CAGGTGGCAA AACAGGCGCA
GACAAAACCA TGCTCATTGA TTTATGGGCA GCCTGTAAAG CTATTGATTA CGCAAAAGCG
GCTAATGTGT CACATTTCAT TATGGTTAGC TCTATCGGCG CTGACGATCC CGACCAAGGC
TCAGAACAAA TGAAGCCTTA CTTAGTTGCC AAACACATGG CCGACGAATA CTTGATCAGC
AGTGGCCTTA ACTACACTAT ATTTAGACCG GGTTCATTAA CCGATGATCG TGCCACAGGT
AAAGTCCAAA CCCAACGGCC GAGCAGCAAA GAAAAAATGA CCATTCACAG AGAAGATGTT
GCTCGCGCAC TGACTTACGC TGTAGGAAAA CCACAGCTAG GCGGCAAAGT CTTTGAATTA
TTTAATGGCA GTAAATCCCT CACTGATGTC CTAAATTAA
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| Protein sequence | MNKTLILGAS GQIGNMATKQ LLADGQSVIA LVRDKNKLAD IASDKKLDIV EADLEQDFSQ
AFNDCDQVIF SAGSGGKTGA DKTMLIDLWA ACKAIDYAKA ANVSHFIMVS SIGADDPDQG
SEQMKPYLVA KHMADEYLIS SGLNYTIFRP GSLTDDRATG KVQTQRPSSK EKMTIHREDV
ARALTYAVGK PQLGGKVFEL FNGSKSLTDV LN
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