| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0249 |
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| Symbol | |
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| ID | 4277020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 277356 |
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| End bp | 277970 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133003 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_748950 |
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| Protein GI | 114561437 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGCGG TAGGGCTAAT GTTATTAGCC CTAGTGGGTG GTGTCGTTTA TCAACAGACG
CAAACAGAGC CTATGCCATT GGAGACCAGT TATGTATTTG AGCAGCAGCG CCCATTAGCA
CCATTTACAT TAGCAGACCA ATACGGCAAT GCGTTTACTA ACCAAACGGT GCAAGGTAAA
TGGAGTTTGT TCTTTATTGG TTACACCGCT TGCCCAGATG TATGCCCTAC CACTCTGAAC
AAACTTGCAG CGGCTTATCC ACAACTGCAA AAAATAGCCA GCAATGTACA AGTGGTGTTT
GTGTCAGCAG ACCCCAAACG CGACACTCAA GCTAAACGTT TAGATTACAT AAATTTTTTC
AATAAAGACT TTAAAGCGGT CAGCGCAGAA CACACCGACT TGTTTCCGTT TAGTCGTGAC
TTAGGCTTTG TGTATGCCAT GGTGGGAGAG GACAGTGATT ACCAAGTAGA CCATAGCGCA
TCGTATGTGT TGGTTTCGCC AAGAGGAGAA AAAATAGCAG TATTTAAACC CAAACCACAG
CCTGGGCAGC TCGCACAAAT TCTTAATGCT GAGCTAATTT CTGACTTTAG CCAAATCGTT
CAATCTTGGC GTTAG
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| Protein sequence | MIAVGLMLLA LVGGVVYQQT QTEPMPLETS YVFEQQRPLA PFTLADQYGN AFTNQTVQGK
WSLFFIGYTA CPDVCPTTLN KLAAAYPQLQ KIASNVQVVF VSADPKRDTQ AKRLDYINFF
NKDFKAVSAE HTDLFPFSRD LGFVYAMVGE DSDYQVDHSA SYVLVSPRGE KIAVFKPKPQ
PGQLAQILNA ELISDFSQIV QSWR
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