Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0246 |
Symbol | |
ID | 4277017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 272915 |
End bp | 274849 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133000 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_748947 |
Protein GI | 114561434 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGGA TTTTATGGCT TGTTGTTATT AGTTTATGTC TATTTTCGCT TAGCTCATTT GCCAAACCTC TGCCTATAGA AGCCTTTGCC AGCATCCCAG ATGTCCGCTT TGTTAGCTTA TCTCCTGACG GTAAAAAAAT TGCGTCTCTT GTACGAGTCA GTACTAATGA GCTTGAGGGC CAAGTACTCA CTATTCGCGA TATTCAAACC AATAAAGATA TTTACCCATT ACAGACTGAC AATCAGAAAT TTGTCATTTT ATCGTTAACG TGGGCAAATA ATGATGTCAT CTTAATCGAG TCTAAATATC CCGCCATCCG TCGAGGTGTT CCCACAACCG AAACACGGTT AATAAAATAC TCACTGAGCG ACAATAAAAC CTCAAGTGTG TTTTCTAATC GTTCTCTATC GCGTTTTGTC GATTTACCGC AATTACAAGC ATCGGTTATT GATTATCTTG ACACCGATCC AAACCACATC CTTATGCAAA TTCAAGGTTT AGGTTCTAAA CCGCAATATG AAAGCGTCGT TAAAGTCAGT TTAAAAACAG GCGGTATCAA GACTTTACAA CCAGCACGTA TGCACATTGG AAACTGGTTA ACCGATAGGC AGCACAATGT GCGTATTGGT ATTTATCGCG ATGACACAAC CTACCGTATT TACGAACAAA AAGGAGCGGG TGAAGATCTC CGCAAATTAT GGGAGTTCGA GGCTTTAGCA GAAGACGTAA TTTGGCCTAT CGGTTTTGAC CATGATCCTA ATATCTTATA TATCAGCGCC TATCATCAAG GTTTTAAAGC CATCTTTAAA GTCAACTTAA CTGACCCGAC ATTGACTAAA GAACTCGTTT CTCACAATGA AAATTACGAT ATTGAAGGCT GGCTCGTGTA TTCCGCACTA AAACAAAAGG TCATTGGTTT AAGCACCGAC ATTGAAGGTG AATATCTGTT CTGGGACCAA GATTATATCA AGTTGAACAA TGGTCTTACA ACTGCATTAC CAGAGTCACA TAATGTGATC ACTCAGTTCA GTGATGATGA ACGTCGTTAC ATCGTTTATG CAACTGGTCC TATAGAATCT GGTGCGTATT ACTTTGGTAA TAGAGACCAA AAGGCACTTT ACCCTATAGC TTACCGTTAC AGCCAATTGC CACCAGAAGT GTTATCTCAA CCGCAAACAG TCCATTATAA TGCTCGTGAT GGTTTAGCCA TTGAAGCCTT TCTCACTACT CCAAAAGACA TTGACGCCAA AAACTTACCG ACCATAATTT TCCCCCATGG TGGACCTATT AGCTACGACT CAACCACGTT TGATTATTGG GCGCAGTTTT TAGCTAATCG TGGCTATGCT GTGCTACAAA TGAATTTTCG CGGCTCGTCA GGCTATGGCT TCAATTTCAT GAGTTCGGGT CTTAAAAACT GGGGCCTAGA AATGCAAACC GACATTGAGG ATGGTACTCA CTGGCTTATC GAACAAGGTA TTAGCGATCC TAAACGCGTG TGTATTGTCG GTGCCAGTTA CGGCGGTTAT GCCGCATTAA TGGGCGTAGC TATCACCCCA GATCTGTATC AATGTGCCAT TAGTGTCGCG GGCGTAACTG ACCTTGAATA TTTAGTTAAA TCATCGCGTC GGTACGACAA TAGCAAAATT GTTAAAAAAC AAATTGGTGA TGATTACGAC GATTTGTATC AGCGCTCACC TATTAGCAAA GTAGCCAATA TTAACGTGCC GGTATTATTA ATCCACGGCA CTAAAGATCG CGTGGTGCGA GTGCAACACA GTGAAGAAAT GTATGATGCG CTTAAGGATT TACATAAACC CGTAAAGTAT ATCGAACTGG AAAATGGCGA TCATTACTTA AGTAATAATG AACATCGTCT TACAACATTC ATTGCAATAG AACACTTCTT AGCGACCAAT CTTGGGGTAA AATAA
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Protein sequence | MKRILWLVVI SLCLFSLSSF AKPLPIEAFA SIPDVRFVSL SPDGKKIASL VRVSTNELEG QVLTIRDIQT NKDIYPLQTD NQKFVILSLT WANNDVILIE SKYPAIRRGV PTTETRLIKY SLSDNKTSSV FSNRSLSRFV DLPQLQASVI DYLDTDPNHI LMQIQGLGSK PQYESVVKVS LKTGGIKTLQ PARMHIGNWL TDRQHNVRIG IYRDDTTYRI YEQKGAGEDL RKLWEFEALA EDVIWPIGFD HDPNILYISA YHQGFKAIFK VNLTDPTLTK ELVSHNENYD IEGWLVYSAL KQKVIGLSTD IEGEYLFWDQ DYIKLNNGLT TALPESHNVI TQFSDDERRY IVYATGPIES GAYYFGNRDQ KALYPIAYRY SQLPPEVLSQ PQTVHYNARD GLAIEAFLTT PKDIDAKNLP TIIFPHGGPI SYDSTTFDYW AQFLANRGYA VLQMNFRGSS GYGFNFMSSG LKNWGLEMQT DIEDGTHWLI EQGISDPKRV CIVGASYGGY AALMGVAITP DLYQCAISVA GVTDLEYLVK SSRRYDNSKI VKKQIGDDYD DLYQRSPISK VANINVPVLL IHGTKDRVVR VQHSEEMYDA LKDLHKPVKY IELENGDHYL SNNEHRLTTF IAIEHFLATN LGVK
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