| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0243 |
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| Symbol | |
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| ID | 4278676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 270784 |
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| End bp | 271590 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132997 |
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| Product | competence protein ComF |
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| Protein accession | YP_748944 |
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| Protein GI | 114561431 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCAA TCAATATTTC AATCGACATC ACCCACATAC TAGGCTTATG CCTCAAGCGC
ATTCAGCATG CTAGGGTGAT TTTACTAGGC AGTTTACCCA ACCGTTGCTT GCTGTGCCAG
CAAAGGATAG ATCAAACGGG TTATCAGCAA TTGTTTCCTA ATCAAGTCCT CACAGGTGTT
TGCCAAGTGT GTTTAGCGGC GAGTTTGTAT CAGCATGAAG TGTGCTTAGG TTGTGGTCGC
GAAATAGCTC TGCTGCAGGC TTATTGTGGA AAGTGTTTGA AACAAGAGCC CAATTATGTG
GTTGCACCTT GTAGTTATCA TCAAGGACTG GGACCTGTTA TTGCCGCCAT TAAATACCAA
CAGCAATGTG CACCGCTTAA CGCGATAACT CAGCAATTAG CCTGTCGAAT CGCATTATTA
ATTAAGCACG GCATTATTAG GCGTCCACAA GTGTTAATCC CCGTTCCATT ACATCCAAAT
CGTTTACGTC AGCGAGGTTT TAATCAAGCT TGGCTCATTG CTAAAGAGTT AAGCCTTTTA
ACGAATATTC CTCTAGATGA TCGTTGCTTA ATTCGAATTG TTGATACTTT GCCACAAACG
GGACTAGCGG GTAAGCAGAG GCGTAAAAAC TGCCATGGTG CATTTGCATT ACAACCAAAC
ATGACATATC AGCGTGTTGC GTTGATTGAT GATGTGGTCA CGACTGGAAC AACCGTAGAT
GAAATTGCAG GTTTATTTAG TCTACAGTTT ATCCATGTGC AGACTTGGTG CCTTGCGCGT
GCTGAAGCGC CGGGATTGTT AGATTAA
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| Protein sequence | MPPINISIDI THILGLCLKR IQHARVILLG SLPNRCLLCQ QRIDQTGYQQ LFPNQVLTGV
CQVCLAASLY QHEVCLGCGR EIALLQAYCG KCLKQEPNYV VAPCSYHQGL GPVIAAIKYQ
QQCAPLNAIT QQLACRIALL IKHGIIRRPQ VLIPVPLHPN RLRQRGFNQA WLIAKELSLL
TNIPLDDRCL IRIVDTLPQT GLAGKQRRKN CHGAFALQPN MTYQRVALID DVVTTGTTVD
EIAGLFSLQF IHVQTWCLAR AEAPGLLD
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