| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0207 |
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| Symbol | |
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| ID | 4278133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 228610 |
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| End bp | 229503 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132961 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_748908 |
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| Protein GI | 114561395 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC CGATCACTAT CGACGCATTA CGCGCCTTAG ATGCAATTGA ACGTAAGGGC
AGTTTTGCTG CTGCAGCAGC ATCGTTATAT CGAGTGCCAT CAGCACTGAC TTACACCATC
AAAAAACTTG AAGATGATAT GGGTACGGCG TTATTTGACC GTACAAAGCA AAAAGCACAA
CTGACACCCG CAGGTAAAAT TGTATTAGAG CAAGGACGGC AGATTTTGTT AGCCACCAAT
CGGTTGGTTG ATTCAGTGCA GCAATTAGAA TCTGGCTGGG AAACCGAAAT ACGGTTATCA
CGCGACACGG TTATCCCTCA GGGGGTATTG TTTCAATTAA TTGAACAATT TAATCAGCTA
GAACATTCGG TCGACATTAG TGTCGATGTT GAAGCCGTCG GTGGTGGTTG GGATGCATTA
CATAGCCGAC GCGCCGATAT TGTGATTGGT GCATCTGGCG AGTTACCAAG AGGTGTATTT
CAAACCCATA AAATAGGCGA GATTGAATTT GTGTTTGCGG TTGCGCCACA TCATCCATTG
GCGTTTGTTG ATGGCATATT AGAAGCCGAC AAATTAACAG ATTATGCTTC GGTTGTGGTT
GCTGATACAT CACAACTTTT ACCCACTCGA AGCAGCGGTA TGTTCAACAG TAAGCAGGTA
ATTAGGGTCA ACACCATGGA AACTAAAATA GCGGCACAGC GACAAGGTTT GGGGATTGGT
TTTTTACCTA GGCACATGGT GCAATGTTAT TTTGATAGTG GCGAATTGAT TGAAAAATCC
TGTTCAATTC CAAGACCAAA TCAAAGTTTG TACATTGCTT GGCATAAAGA TCATCAAGGC
CGTGCATTTG ACTGGTTTGT GGACCATTTA CCTAAAGCCG ACTGGGGTTT ATAA
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| Protein sequence | MQNPITIDAL RALDAIERKG SFAAAAASLY RVPSALTYTI KKLEDDMGTA LFDRTKQKAQ
LTPAGKIVLE QGRQILLATN RLVDSVQQLE SGWETEIRLS RDTVIPQGVL FQLIEQFNQL
EHSVDISVDV EAVGGGWDAL HSRRADIVIG ASGELPRGVF QTHKIGEIEF VFAVAPHHPL
AFVDGILEAD KLTDYASVVV ADTSQLLPTR SSGMFNSKQV IRVNTMETKI AAQRQGLGIG
FLPRHMVQCY FDSGELIEKS CSIPRPNQSL YIAWHKDHQG RAFDWFVDHL PKADWGL
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