| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0165 |
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| Symbol | rpsE |
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| ID | 4277235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 178575 |
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| End bp | 179078 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638132915 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_748866 |
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| Protein GI | 114561353 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000786846 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAT TAGAAGCTCA GCAAAAAGAC GATCTGCAAG AGAAATTAAT TGCAGTTAAT
CGTGTTTCTA AAGTAGTTAA GGGCGGTCGT ATCTTTAGCT TCACAGCACT AACAGTAGTG
GGTGACGGTA ACGGTAAGAT TGGCTATGGC TATGGTAAAG CGCGTGAAGT TCCAGCTGCT
ATTCAAAAAG CAATGGAAAA AGCCCGTCGT AATATGGTGA CAGTGGAGTT GAATGCAGGT
ACTTTGCATC ACCCAGTTAA GGGTCGTCAT ACTGGTTCTA AAGTTTATAT GCAACCAGCA
TCACAGGGTA CCGGTATTAT TGCCGGTGGC GCAATGCGTG CCGTATTGGA AGTAGCAGGC
GTTCATAACG TTCTGTCAAA AGCATACGGT TCTACTAACC CGATCAACAT CGTTCGCGCA
ACTGTCGATG CGTTGGTGCA CATGAAGTCA CCAGCTCAAA TCGCAGCAAA ACGTGGCCTG
AATGTTGATG AGATTCGGGG GTAA
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| Protein sequence | MAKLEAQQKD DLQEKLIAVN RVSKVVKGGR IFSFTALTVV GDGNGKIGYG YGKAREVPAA
IQKAMEKARR NMVTVELNAG TLHHPVKGRH TGSKVYMQPA SQGTGIIAGG AMRAVLEVAG
VHNVLSKAYG STNPINIVRA TVDALVHMKS PAQIAAKRGL NVDEIRG
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