| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0162 |
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| Symbol | rpsH |
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| ID | 4277232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 177265 |
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| End bp | 177657 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638132912 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_748863 |
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| Protein GI | 114561350 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000180901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCTAT TGCGGATATG TTAACCCGTA TTCGTAACGG CCAAGCTGCT
AACCACGTAT CTGTTAAGAT GCCTTCAGCT AAGTTAAAAG TAGCAATTGC GAAATTACTT
AAAGATGAAG GTTTCATTAC TGAATACGCC GTAGCAGATG AAGCTAAGCC TGAATTAGAA
ATTACGTTAA AGTATTTTCA AGGCAAACCA GTCGTTGAGA CTATCCAGCG TGTAAGTCGC
CCTGGTCTTC GTATTTACAA AGGTAAAGAC GAGCTACCAA AGGTGATGGG CGGTCTGGGT
ATCGCAATTG TGTCCACTTC TCAAGGCTTG ATGACTGATC GCGCCGCCCG CCAAAATGGC
ACGGGTGGCG AGGTTATCTG CTACGTAGCG TAA
|
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| Protein sequence | MSMQDPIADM LTRIRNGQAA NHVSVKMPSA KLKVAIAKLL KDEGFITEYA VADEAKPELE
ITLKYFQGKP VVETIQRVSR PGLRIYKGKD ELPKVMGGLG IAIVSTSQGL MTDRAARQNG
TGGEVICYVA
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