Gene Sfri_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0159 
SymbolrplX 
ID4277229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp176057 
End bp176371 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content43% 
IMG OID638132909 
Product50S ribosomal protein L24 
Protein accessionYP_748860 
Protein GI114561347 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.58735e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTA AAATCCGTCG TGAAGACGAA GTAATTATAT TAGCAGGTAA AGACAAGGGT 
AGCCGCGGTA AGGTTTCTCA AGTTCTACCT ACTGGTAAGT TAATTGTTGA AGGCTTTAAT
CTTGTTAAAA AGCACCAGAA ACCTAACCCT CAATTGGGTG TTGCTGGCGG CGTTATCGAG
AAAGAAGCAC CGATGCAAGC ATCAAACGTT GCGATCTTTA ACCAAGCCAC AGGCAAGGCA
GATCGTGTTG GTTTCCGATT TGAAGACGGC AAAAAAGTCC GTTTCTTTAA ATCGAACAGC
GAACTCGTTA AGTAA
 
Protein sequence
MAAKIRREDE VIILAGKDKG SRGKVSQVLP TGKLIVEGFN LVKKHQKPNP QLGVAGGVIE 
KEAPMQASNV AIFNQATGKA DRVGFRFEDG KKVRFFKSNS ELVK