| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0154 |
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| Symbol | rpsC |
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| ID | 4277819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 173951 |
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| End bp | 174640 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638132904 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_748855 |
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| Protein GI | 114561342 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000551432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACAGA AAGTACATCC TAATGGTATC CGTCTGGGTA TCACTAAGCC TTGGATCTCT
ACCTGGTACG CAGATAAGTC AGACTATGCA AATAATCTGA ACAGCGACTG GGAAGTGCGT
CAATATTTAA CTGAAAAGTT AAAAGCCGCA TCAGTATCTA AGATTGTTAT TGAACGCCCA
GCGAAAAGCA TCCGCGTTAC TATTCACACA GCCCGTCCAG GCATTGTGAT TGGTAAGAAA
GGTGAAGACG TTGAAGTATT ACGTGCCTAT GTGTCTAAAA TCACTGGTAC TACTGCTCAA
ATCAACATCG CTGAGATCCG TAAGCCTGAA TTAGACGCTA AGCTCGTTGC TGACTCTATT
GCTCAGCAGT TAGAGCGTCG TGTTATGTTC CGTCGTGCTA TGAAGCGCGC AGTACAAAAC
GCAATGCGCA TTGGTGCTCA AGGTATCAAA GTTCAAGTGA GCGGCCGTTT AGGCGGCGCT
GAAATTGCGC GTGCAGAATG GTATCGTGAA GGTCGTGTAC CTTTGCATAC TTTGCGTGCT
GATATCGACT ATTCAACCGC AGAAAGTCAC ACTCAATACG GTGTGATTGG TATTAAAGTT
TGGATCTTCA AAGGCGAAGT TCTAGACGGT TTAGTACCTG CTATTGAAGA GCCTAAGCAG
CAACCTAAGC GTAAGCCTCG TGGTAAATAG
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| Protein sequence | MGQKVHPNGI RLGITKPWIS TWYADKSDYA NNLNSDWEVR QYLTEKLKAA SVSKIVIERP
AKSIRVTIHT ARPGIVIGKK GEDVEVLRAY VSKITGTTAQ INIAEIRKPE LDAKLVADSI
AQQLERRVMF RRAMKRAVQN AMRIGAQGIK VQVSGRLGGA EIARAEWYRE GRVPLHTLRA
DIDYSTAESH TQYGVIGIKV WIFKGEVLDG LVPAIEEPKQ QPKRKPRGK
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