Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0151 |
Symbol | rplB |
ID | 4277816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 172473 |
End bp | 173297 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638132901 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_748852 |
Protein GI | 114561339 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000141457 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTA TTAAGTGTAA GCCAACCTCT CCAGGTCGTC GCCACGTAGT TAAAGTGGTG AATACGGACC TGCATAAGGG TAAACCTTTT GCTGGCCTGT TGGCGAAAAA AACTAAAAGT GGTGGCCGTA ATAATACTGG CCGTATCACT GTACGCCACG TAGGTGGTGG ACATAAGCAG CACTATCGTA TTGTTGACTT CAAACGCAAC AAAGATGGTA TCCCTGCGAA AGTTGAACGT CTTGAATACG ATCCAAACCG TACAGCGCAC ATCGCGCTAG TACTGTATGC AGATGGTGAG CGTCGTTATA TTCTTGCTGC AAAAGGCATG AAAGCTGGCG ACCCAATCCA ATCTGGCTTG GATGCAGAAA TCAAGACTGG TAACGCTAGA CCGTTACGCA ACATTCCAGT AGGTAGTGTT GTACACGCTG TCGAAATGAA GCCTGGTAAA GGCGCTCAAA TCGCACGTTC AGCTGGTGCT TATGTACAAG TTGTTGCTCG TGATGGTGCT TATGCAACTC TACGTCTTCG CTCTGGCGAA ATGCGTAAAG TTCCAGTAGA TTGCCGCGCG ACATTTGGTG AAGTTGGTAA TGCCGAGCAC ATGCTACGCC AGTTAGGCAA AGCAGGTGCT AAGCGCTGGA GAGGCGTACG CCCTACAGTT CGAGGTGTTG CAATGAACCC AGTAGACCAT CCACATGGTG GTGGTGAAGG CCGTACTTCT GGTGGACGTC ATCCAGTGAG TCCATGGGGT GTGCCGACTA AGGGTTATAA AACTCGTAGC AACAAGCGCA CTGATAAGTA CATCGTACGT CGTCGTAATA AATAG
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Protein sequence | MAVIKCKPTS PGRRHVVKVV NTDLHKGKPF AGLLAKKTKS GGRNNTGRIT VRHVGGGHKQ HYRIVDFKRN KDGIPAKVER LEYDPNRTAH IALVLYADGE RRYILAAKGM KAGDPIQSGL DAEIKTGNAR PLRNIPVGSV VHAVEMKPGK GAQIARSAGA YVQVVARDGA YATLRLRSGE MRKVPVDCRA TFGEVGNAEH MLRQLGKAGA KRWRGVRPTV RGVAMNPVDH PHGGGEGRTS GGRHPVSPWG VPTKGYKTRS NKRTDKYIVR RRNK
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