Gene Sfri_0151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0151 
SymbolrplB 
ID4277816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp172473 
End bp173297 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content49% 
IMG OID638132901 
Product50S ribosomal protein L2 
Protein accessionYP_748852 
Protein GI114561339 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000141457 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTTA TTAAGTGTAA GCCAACCTCT CCAGGTCGTC GCCACGTAGT TAAAGTGGTG 
AATACGGACC TGCATAAGGG TAAACCTTTT GCTGGCCTGT TGGCGAAAAA AACTAAAAGT
GGTGGCCGTA ATAATACTGG CCGTATCACT GTACGCCACG TAGGTGGTGG ACATAAGCAG
CACTATCGTA TTGTTGACTT CAAACGCAAC AAAGATGGTA TCCCTGCGAA AGTTGAACGT
CTTGAATACG ATCCAAACCG TACAGCGCAC ATCGCGCTAG TACTGTATGC AGATGGTGAG
CGTCGTTATA TTCTTGCTGC AAAAGGCATG AAAGCTGGCG ACCCAATCCA ATCTGGCTTG
GATGCAGAAA TCAAGACTGG TAACGCTAGA CCGTTACGCA ACATTCCAGT AGGTAGTGTT
GTACACGCTG TCGAAATGAA GCCTGGTAAA GGCGCTCAAA TCGCACGTTC AGCTGGTGCT
TATGTACAAG TTGTTGCTCG TGATGGTGCT TATGCAACTC TACGTCTTCG CTCTGGCGAA
ATGCGTAAAG TTCCAGTAGA TTGCCGCGCG ACATTTGGTG AAGTTGGTAA TGCCGAGCAC
ATGCTACGCC AGTTAGGCAA AGCAGGTGCT AAGCGCTGGA GAGGCGTACG CCCTACAGTT
CGAGGTGTTG CAATGAACCC AGTAGACCAT CCACATGGTG GTGGTGAAGG CCGTACTTCT
GGTGGACGTC ATCCAGTGAG TCCATGGGGT GTGCCGACTA AGGGTTATAA AACTCGTAGC
AACAAGCGCA CTGATAAGTA CATCGTACGT CGTCGTAATA AATAG
 
Protein sequence
MAVIKCKPTS PGRRHVVKVV NTDLHKGKPF AGLLAKKTKS GGRNNTGRIT VRHVGGGHKQ 
HYRIVDFKRN KDGIPAKVER LEYDPNRTAH IALVLYADGE RRYILAAKGM KAGDPIQSGL
DAEIKTGNAR PLRNIPVGSV VHAVEMKPGK GAQIARSAGA YVQVVARDGA YATLRLRSGE
MRKVPVDCRA TFGEVGNAEH MLRQLGKAGA KRWRGVRPTV RGVAMNPVDH PHGGGEGRTS
GGRHPVSPWG VPTKGYKTRS NKRTDKYIVR RRNK