| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0150 |
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| Symbol | rplW |
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| ID | 4277815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 172154 |
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| End bp | 172456 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132900 |
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| Product | 50S ribosomal protein L23 |
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| Protein accession | YP_748851 |
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| Protein GI | 114561338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0089] Ribosomal protein L23 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000125205 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCGCG AAGAACGTTT GCTAAAAGTT ATTCTTGGTC CACATATCTC TGAAAAGAGT
ACTGTGCTTG CTGAGAAAAA CAACACTGTA GTTTTCCGCG TAGCCATCGA TGCAACTAAA
GCAGAGATTA AAGCTGCAGT AGCGAAGCTA TTTGAAGTTG AAGTTGATTC TGTTCGCACT
TTAGTTAATA AAGGCAAAAC CAAGCGTACC GGTGGCCGTG TAGGTCGTCG TATCGATTGG
AAAAAAGCTT ATGTTACTTT AGCTGCTGGT GCTGAAATCG ATTTCGTCGG CGGCGCTGAA
TAA
|
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| Protein sequence | MIREERLLKV ILGPHISEKS TVLAEKNNTV VFRVAIDATK AEIKAAVAKL FEVEVDSVRT
LVNKGKTKRT GGRVGRRIDW KKAYVTLAAG AEIDFVGGAE
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