Gene Sfri_0144 details

Gene Information

• Locus tag: Sfri_0144
• ID: 4277809
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 166304
• End bp: 166774
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638132894
• Product: 30S ribosomal protein S7
• Protein accession: YP_748845
• Protein GI: 114561332
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0049] Ribosomal protein S7
• TIGRFAM ID: [TIGR01029] ribosomal protein S7, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000170326
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAGAC GTCGCGTTGT AGGACAACGT AAAATCCTAC CAGATCCAAA GTTTCACAGT 
GAGTTGTTGG CTAAGTTCAT CAACGTCATT ATGCAGGACG GCAAAAAGTC GACTGCAGAA 
AAAATTATCT ACAAGGCACT AGATGTTGTC GCTGAAAAGA AAAGCGAAAA TCATTTAAGT 
ATCCTTGAGG CAGCCCTTGA TAACGTTCGC CCATCAGTCG AAGTTAAATC TCGTCGTGTT 
GGTGGTTCTA CTTATCAAGT ACCATGTGAA GTTCGTCCTG TGCGTCGTAA CGCACTAGCG 
ATGCGCTGGT TAGTTGAAGC TGCTCGCAAG CGTGGTGAAA AATCTATGGC TCTACGTCTA 
GCAGGTGAAA TGCTAGATGC GTCTGAAAAC AAAGGTACTG CGGTTAAGAA GCGTGAAGAC 
GTGCATCGCA TGGCTGAAGC TAACAAAGCC TTTGCCCATT ACCGTTGGTA A 

 

Protein sequence

MPRRRVVGQR KILPDPKFHS ELLAKFINVI MQDGKKSTAE KIIYKALDVV AEKKSENHLS 
ILEAALDNVR PSVEVKSRRV GGSTYQVPCE VRPVRRNALA MRWLVEAARK RGEKSMALRL 
AGEMLDASEN KGTAVKKRED VHRMAEANKA FAHYRW