| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0113 |
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| Symbol | |
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| ID | 4277183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 126546 |
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| End bp | 127751 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132854 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_748814 |
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| Protein GI | 114561301 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGAAC GGCTATTTAT CCGGTTAGGA AAATCATCAG AACACCCATG TTCGTGGCTT
GTATGGTCAG AACAAGAGCA AGAGATCATC GCTTCTGGTG AATTATCTGA TGCCGCCAGT
CTCAGCACTT TAGCTGAGCG TGCGGGTAAT CGTCCTGTTG ATGTACTTGT GCCTGCGGCC
AACATGACAT TGACACAAAT TATGTTGCCC GAAAAAGGTC AACGCCAAGC ATTAAAGGCG
TTGCCATACA TGTTAGAGGA ATCATTAGCG ACGAATGTAG ACAATATGCA TTTTGTTGTT
GGGCCTCGTG AAGGTGAGCA GCTCAATGTA GCTGCAGTGG CACATGAGCA AATGCAAATT
TGGCTTGAAT GGCTTCATCA TGCAGGCTTA AAAGTAAAAC GTATCGTGCC AGATTGTTTA
GCGTTGCCGT TAGAGCAATG TCGTTGGGCA GCAATGAGTG TTGGTAGCGA GTATTTAATC
CGAACGTCTG AAGGTAGCGG TGTTAGCATG CCTAAAGCAT GGTCTGCATT TGCACTGCCA
AAGCTATTAA TAGCTGCAAA ACCTAATGAT AATGAATCGA TTAGTGTTGC AAGCTACAGT
GACGATATTG TATTTGAAGG TGTGGATATT AATAACAAGC CACTAGATTT ACCGATGATG
GTACTAGCAA AAGGCATTTT GAACGCCCCA ATCAATTTAC TAAGTGGCAT TTATAAACCT
AAGCATGAAT ACAGTAAACA GTTACTCACC TGGAAAAACG CGGCGATTGT AGTGATGATT
GCGATTGTTT TAGCCTTAGC AAATAAAGGC ATCGCCATCC ATCAACTGAA TAATCAGACC
ACAGAGCTGC AAGCTCAAAG CGAAATGATT TTTAAACAAG CTGTACCGGG TGTAAACCGT
ATTGTTAATA TGCGCTCACA AATGGGCAGT GAATTACGCA GCATGCAAGG CCAAGGTGGC
GGTGCAGTAT TTTTTGAAAT GTTAGATGGT TTAAAGCCAG CGTTTAGTAA GGTGCCAGAA
CTTAAACCGA ATACTTTGCG TTACGAAGCC AATCGTAATG AGTTACGAAT GCAAGTCACA
GCAAAAACGT ACGGCCAAAT AGATACATTT AAAGAGCTTG TTAGCAAAGA CTACCTCCTC
GAAGGTGGTG CCATGAATAG TAGCGAAGAA AGCGTTACCA GTACGCTGAC GTTAAGGAAT
AAATAA
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| Protein sequence | MSERLFIRLG KSSEHPCSWL VWSEQEQEII ASGELSDAAS LSTLAERAGN RPVDVLVPAA
NMTLTQIMLP EKGQRQALKA LPYMLEESLA TNVDNMHFVV GPREGEQLNV AAVAHEQMQI
WLEWLHHAGL KVKRIVPDCL ALPLEQCRWA AMSVGSEYLI RTSEGSGVSM PKAWSAFALP
KLLIAAKPND NESISVASYS DDIVFEGVDI NNKPLDLPMM VLAKGILNAP INLLSGIYKP
KHEYSKQLLT WKNAAIVVMI AIVLALANKG IAIHQLNNQT TELQAQSEMI FKQAVPGVNR
IVNMRSQMGS ELRSMQGQGG GAVFFEMLDG LKPAFSKVPE LKPNTLRYEA NRNELRMQVT
AKTYGQIDTF KELVSKDYLL EGGAMNSSEE SVTSTLTLRN K
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