| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0107 |
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| Symbol | |
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| ID | 4277177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 122050 |
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| End bp | 123282 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638132848 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_748808 |
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| Protein GI | 114561295 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCGT TTGAATACAA AGCCCTTGAT AGCAAAGGCA AGCAACAAAA AGGTGTGATC
GAAGCTGATA CCGCGCGACA TGCAAGAAGC CAGCTGCGTG AGCAGCGCCT TATGCCGCTG
GAACTTCAGC CTGTTAGTGA AAAAGAAGCA CGTTCACAGC GTGGCGGTTT TAATTTAGCA
AACCTATTTA AAAAGCGTAT TTCTGTTGCC GAACTGGCAT TGATCACACG CCAAATCGCA
ACATTAGTGG CCGCAGGCTT ACCGATTGAA GAAGCGTTAA AAGCCGTGGG GCAGCAGTCT
GAGAAAGATC GCTTAGGTAG CATGATTATG GCGGTGCGTT CTCGGGTGGT TGAAGGTTAC
AGCTTAGCTG ACTCAATGGC CGAATTTCCG CATGTATTTG ATGATTTATA CCGCGCGATG
GTAGCGTCGG GTGAGAAATC AGGCCATTTA GAAGTAGTGC TTAATCGACT TGCCGATTAC
ACAGAGCGTC GTCAGCAACT CAAATCCAAG CTTACTCAAG CAATGATTTA CCCTATTGTA
TTAACCGTGG TCGCTATTGG TGTTATTGCC GTGTTATTGG CTGCTGTGGT GCCAAAGGTT
GTTGGGCAGT TTGAGCACAT GGGCCAAGAA TTACCTGGCA CAACTCAGTT TTTGATTCTT
GCCTCAGATT TTGTACAACA TTGGGGGGTT GTGGTCGTAC TGCTTATTTT TGCTGCTATG
GTGATGTTCC AGCGGCTGCT TACCAATCCG ATTATGCGGA TGAAATATGA TACAGCTCTT
TTGCAAATGC CCGTAATTGG CAAAGTCAGT AAAGGGCTTA ATACCGCCCG ATTTGCGCGA
ACATTAAGTA TTTTGTCAGC CAGCTCGGTC CCATTACTTG ATGGGATGCG AATTGCCAGC
GAAGTTTTGC AAAATGTTAA GGTGCGCGCT GCTGTTGATG AGGCTACGGC GCGAGTCCGT
GAGGGAACTA GTTTAGGCAC GGCGTTGACT AATACTAAGC TATTCCCTGC AATGATGTTG
TATATGATTG CATCGGGTGA AAAAAGTGGC CAGCTTGAAA ACATGTTAGA ACGTGCAGCA
GACAACCAAG ACCGAGAGTT CGAGTCGAAC GTTAATATTG CATTGGGAGT ATTTGAACCT
ATGCTAGTCG TGAGTATGGC ATCGGTTGTA TTATTTATTG TAATGGCCAT TTTACAGCCT
ATTTTAGAGT TAAATAACTT AATCAGCGGC TAG
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| Protein sequence | MAAFEYKALD SKGKQQKGVI EADTARHARS QLREQRLMPL ELQPVSEKEA RSQRGGFNLA
NLFKKRISVA ELALITRQIA TLVAAGLPIE EALKAVGQQS EKDRLGSMIM AVRSRVVEGY
SLADSMAEFP HVFDDLYRAM VASGEKSGHL EVVLNRLADY TERRQQLKSK LTQAMIYPIV
LTVVAIGVIA VLLAAVVPKV VGQFEHMGQE LPGTTQFLIL ASDFVQHWGV VVVLLIFAAM
VMFQRLLTNP IMRMKYDTAL LQMPVIGKVS KGLNTARFAR TLSILSASSV PLLDGMRIAS
EVLQNVKVRA AVDEATARVR EGTSLGTALT NTKLFPAMML YMIASGEKSG QLENMLERAA
DNQDREFESN VNIALGVFEP MLVVSMASVV LFIVMAILQP ILELNNLISG
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