| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0100 |
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| Symbol | |
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| ID | 4278272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 112015 |
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| End bp | 113874 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132841 |
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| Product | peptidase M14, carboxypeptidase A |
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| Protein accession | YP_748801 |
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| Protein GI | 114561288 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2866] Predicted carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.719782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCT TTTTGCTTGC TAGTTTAATG GTTAGTCCGT TACTTATCTG TTCCACTTTC
ACCTATGCTA ACAATGCTGT GCCTACTGCC ACTCAGGTAC CAACAGAGCA AATAACGCAT
CTCGAAAACG ACAGCATACT GCCACCCATT CACCCTTGGT CAGGCGCCAG TGAAACGTTA
CTGTTAAGTG CAGATCAGCC ATGGGCAACC CCTTTTGAGC AACAAGGTTA TGTTTCCAGC
CCAAACTATC ACGACACCAT GGAATGGTTA GACAAACTCG TCGACAGTAG CGACGTGTTA
CAAAAAGTCA GCATTGGTAA AAGCCCCCAA GGACGAGATA TATGGATGAT TGTTGCGTCA
CAAGATGGGG TGTCAACGGC GCAAGCATTA AGTGATAACG GTAAAGCAAC GGTATTAGTG
CAAGCAGGTA TTCATTCAGG TGAAATTGAC GGTAAAGATG CAGGCATGAT GCTACTACGT
GATATCAGCC ATCGTAACAA ACGCGATTTA CTTGAAAACG TTAATTTACT GTTTATTCCT
ATCTTCAGTG TCGATGCCCA TGAACGTAGC AGCAAATTCA ATCGGGTCAA TCAACGTGGA
CCGGTCAATA TGGGCTGGCG CACCACGGCC AACAATCTAA ATTTAAACCG TGATTATGCT
AAAGCTGATG CATTGGAAAT GCAGCACCTC ATTCAAGCGA TAAATATATG GCAGCCAGAC
TTATATATTG ATATCCATGT GACCGATGGT ATTGACTACC AATACGATGT CACCTTTGGC
TACAACGTTG CACAAGGCTA TAGCCCAAGT ATTTTTACAT GGTTAGAGTC TATTTACCGC
CCCGCGGTTG AACATGCATT AACCGAACAA GGCCACATTC CGGGCCAGTT GGTATTTGCT
AACGATAATA CTGACATGAC TAAAGGCCTG TCATTGTGGA ACCCTAGCCC ACGCTTTTCC
AATGGTTACG GTGATGCTCG CCATTTACCG ACGATCCTAA TTGAAAACCA TAGCCTTAAA
CCTTATAAGC AACGCGTTCT AGGTACTTAC ATTACACTCG AGCAAACCCT TAAAACGGTG
GCAAAAAATA GCACCAAGCT AAAGTCTGCG ATTAATGAAG ACAAATATCG TAACCCAAGC
GAGTTAACCA TTAGTTGGCA AAATGAAACC TTAGCTGAAG GAAAAGACTT TAAAGGGATT
GATTACCGTG TTGAGCAAAG CCCAATCAGT GGTGACAAAG TTGTACGCTG GACTGGAGAG
CCTAAGTTAT ATGAAAACTT ACCAATTGTG GCTAATACAA AAGCTGATAT CACGGTAACT
CGTCCTGTGG CTTATTATAT TCCACCACAA TGGACAAACG TTATTGAACG TTTATCTTTA
CATGGTATTC GAATGACACG ACTGAATAAG CCAGCCTCGA TAACCGCGCA GCAATATCAA
TTTAGCGATC CATTATTCTC AAGTGCTGAT TATGAAGGTC ATCAAACGGT AACGGCAACA
ACGGCTATTC ATAAAATAAA CGCCTACCTT CCTGCAGGTA GCATGCGTAT TCCAACCGAC
CAGCCTTTGG GTGACTTAGC AATGCTATTA CTTGAACCTC AAGCTGAGGA TTCATTGTTT
TATTGGGGCA TGTTTAATAC CATTTTCACC CGTACAGAAT ACATTGAAGA CTATGCAGTG
GAACCTTTAG CGGCAAAAAT GTTACTCGAC AATCCAGCTC TACAAGCTGA GTTTGATCAA
GCGCTTAAAG ACCCTGATTT TGCGAAAGAT AGCCAAGCAA GATTACGCTG GTTTTACCAA
CGTAGCCCAT ACTACGACAA CGAATACATG AAGTACCCTG TGTTGCGAGC ATCTAAATAA
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| Protein sequence | MRRFLLASLM VSPLLICSTF TYANNAVPTA TQVPTEQITH LENDSILPPI HPWSGASETL
LLSADQPWAT PFEQQGYVSS PNYHDTMEWL DKLVDSSDVL QKVSIGKSPQ GRDIWMIVAS
QDGVSTAQAL SDNGKATVLV QAGIHSGEID GKDAGMMLLR DISHRNKRDL LENVNLLFIP
IFSVDAHERS SKFNRVNQRG PVNMGWRTTA NNLNLNRDYA KADALEMQHL IQAINIWQPD
LYIDIHVTDG IDYQYDVTFG YNVAQGYSPS IFTWLESIYR PAVEHALTEQ GHIPGQLVFA
NDNTDMTKGL SLWNPSPRFS NGYGDARHLP TILIENHSLK PYKQRVLGTY ITLEQTLKTV
AKNSTKLKSA INEDKYRNPS ELTISWQNET LAEGKDFKGI DYRVEQSPIS GDKVVRWTGE
PKLYENLPIV ANTKADITVT RPVAYYIPPQ WTNVIERLSL HGIRMTRLNK PASITAQQYQ
FSDPLFSSAD YEGHQTVTAT TAIHKINAYL PAGSMRIPTD QPLGDLAMLL LEPQAEDSLF
YWGMFNTIFT RTEYIEDYAV EPLAAKMLLD NPALQAEFDQ ALKDPDFAKD SQARLRWFYQ
RSPYYDNEYM KYPVLRASK
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