| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0093 |
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| Symbol | |
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| ID | 4278265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 106610 |
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| End bp | 107890 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638132834 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_748794 |
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| Protein GI | 114561281 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATAT CACATTATGG AATAGTCTTT TTCACAATAC TAATGAGTCA TATGGAACAT
AACCAAAGTA TTATTTTCGT TCAATTTTTT AGCTTAATAG CAGTAAGTTG CGCCATAGCT
TGGACATTAC TTGCCTGCCT ATTACGTATT GCACCTAAAG CTAGTTGGTG TTTCGCCGCC
ACCAATATTT GTACACTTAT CGGCATTATG CTTTATACCC AACGTACTGA AGCAATTAAC
TATTTATACT GGTTTGTGGC AGACATGACA ATACTTGTGG GGTTTACTCT GGTGCGTTGG
GGCAGCCAAC ATTTATTTAA GCAGCCTTTA TCTTACCGAT TCGATCTTAT TTTGCTGGCA
ACCACGGCAT TATTAATGCT GTTGGTTCCA CCATCCCTGA CCTACGCTGT CTACTTAGTT
ATTGTAATGA GTATTACCGC AGCAACGTTC ATCACCCTTA GTGGTATTGA TAATTTTCGG
GCGGTAAAAA AACACTTACC GCTGCATTAT GCCGCGTTGA TTAACGTACC TTTTTTCACC
ATAGGCTTAC TGTTTATCAT ACGCGCAGTT GTTTTATTAC TTTTCCCCGA CGAACTTGCC
AACATTTCAG CTGCAGACAA GCTTAACTCA TCGTTAGTGA TGTGGAGCTA CATCATATTA
CTGCTACTCA CTAATCTAGT ATTGTTTGGT AATGCGCTAA CTCGCTTAGT CTACAAGGTC
GCTCGATTAG CCAACAAAGA TCAACTAACT GGCTTATGGA ATAGGCACTC TTTATTAAAC
AAGCTCGAAG AAGTTGATGC CCTATGGCTT CGAAATGGGT TGGCGTATAG TTTAATGGTA
CTCGACTTAG ACCACTTCAA ACGCATTAAT GATACTTACG GGCATTTAGC GGGTGATATG
GTGCTCAAAA ATACTGCTGA CATATTACAA AAATCATTGA GGAAAATTGA TTTCGTTTGT
CGTTATGGTG GTGAGGAGTT TTTAATCATA CTGCCATTAA CCAATAAAAA AGAGGCTCAA
ATAGTGGCCG AAAAAGTACA ACAAAAAATC AATGAAAATA CTGTTTTATG GCAGAAGACC
CATATCAATA CCACTCTCAG CATTGGTTAT GCTACCTGTA AAACTCACCT TAGTATTGAA
CAATTATTAC AACTAGCTGA CGACGCTATG TACCTTGCTA AAAGTAAAGG CCGCAATACA
ATTTGCTCAA TGGATGCAAT GGAAGATTCA ATGGATTCAA TGGAAGAATC AAATGCTGCG
ATAATAACAG AGCAATCGTA A
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| Protein sequence | MLISHYGIVF FTILMSHMEH NQSIIFVQFF SLIAVSCAIA WTLLACLLRI APKASWCFAA
TNICTLIGIM LYTQRTEAIN YLYWFVADMT ILVGFTLVRW GSQHLFKQPL SYRFDLILLA
TTALLMLLVP PSLTYAVYLV IVMSITAATF ITLSGIDNFR AVKKHLPLHY AALINVPFFT
IGLLFIIRAV VLLLFPDELA NISAADKLNS SLVMWSYIIL LLLTNLVLFG NALTRLVYKV
ARLANKDQLT GLWNRHSLLN KLEEVDALWL RNGLAYSLMV LDLDHFKRIN DTYGHLAGDM
VLKNTADILQ KSLRKIDFVC RYGGEEFLII LPLTNKKEAQ IVAEKVQQKI NENTVLWQKT
HINTTLSIGY ATCKTHLSIE QLLQLADDAM YLAKSKGRNT ICSMDAMEDS MDSMEESNAA
IITEQS
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