| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0090 |
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| Symbol | |
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| ID | 4278262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 103823 |
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| End bp | 104506 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638132831 |
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| Product | two component transcriptional regulator, winged helix family protein |
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| Protein accession | YP_748791 |
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| Protein GI | 114561278 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTATGC GTATTTTATT GGTTGAAGAT GATGCTACTA CGTTAAAGTA TGTAGCCGAC
GGATTTACGG CTCAGAAATA TCAAGTTGAT AGCGCGACAG ATGGCCAAGA AGGCCTCACG
TTAGCTAAAC ATAACCAATA TGATTTACTG ATCCTCGATC GCATGTTACC AAAGCTAGAC
GGCTTAACAT TATTGTCTGC TCTGCGTACC AGTGGTAATA AAACACCAGT ACTTATTTTA
TCGGCATTAA GCCATGTTGA TGAGCGTGTA AAAGGTTTAC GTGCGGGTGG TGATGATTAC
ATGACCAAGC CATTTGCCTT TGCTGAATTG TTAGTACGTG CTGAAAAACT TGCGCAACGT
AACGTGGTTG AACCCGCTGC CACTGAAATT GAAGTGGGCA GTTTAAAAAT GGAATTATTA
ACTCGTAAAG TCACCCTTGA CGATAGCGAG TTAATGCTTC AACCAAAAGA ATTTCAATTG
CTTAAATACT TAATGGAACA TCCTAATCAA GTGATTAGCC GTACATTATT ATTTGAAGCA
GTGTGGGACT ACCATTTTGA TCCTCGCACC AACGTGATTG ATGTACATAT TGCCAAGTTA
CGTCGCAAAT TTGAAGAACT TGGTCACGGT GAGTTAATTG AAACCGTTAG AGGGGCTGGA
TATCGCCTTT GTAAAAGGCA TTAA
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| Protein sequence | MTMRILLVED DATTLKYVAD GFTAQKYQVD SATDGQEGLT LAKHNQYDLL ILDRMLPKLD
GLTLLSALRT SGNKTPVLIL SALSHVDERV KGLRAGGDDY MTKPFAFAEL LVRAEKLAQR
NVVEPAATEI EVGSLKMELL TRKVTLDDSE LMLQPKEFQL LKYLMEHPNQ VISRTLLFEA
VWDYHFDPRT NVIDVHIAKL RRKFEELGHG ELIETVRGAG YRLCKRH
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