| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0081 |
|---|
| Symbol | |
|---|
| ID | 4278165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 95924 |
|---|
| End bp | 97573 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638132822 |
|---|
| Product | electron-transferring-flavoprotein dehydrogenase |
|---|
| Protein accession | YP_748782 |
|---|
| Protein GI | 114561269 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCG AGTCAATGGA GTTCGACGTA GTAATTGTCG GTGCTGGCCC TGCAGGTTTA
GCGACCGCTT GTCGTTTAAT GCAAATATCT AAAGATGCTG ATAAAGAAAT CACCGTTTGT
GTGGTAGAAA AAGGCTCTGA AGTGGGTGCT CATATTTTGT CGGGTGCTGT ATTCGAACCT
GATGTACTGG ACGAATTATT TAATGATTGG CGAGATTCAG ACATCCCGCT AACCACTAAA
GTCACTCATG ACGAAATCTA CCTGCTTAAC TCAGAAACAC AATCTCGCTT AATGCCCAAC
AGCTTAGTGC CTAAAACCAT GCACAATGAT GGTAACTACA TCATTAGTGT GGGTAACTTA
GCCCGCTGGT TAGCCAACAG AGCCGAAGCC ATGGGCGTAG AGATTTTCCC TGGTTTTGCA
GCCAGTGAAT TACTGTTTAA TGAAGACAAC AGTGTTAAAG GTATTTTAAT CGGTGATATG
GGTGTTGGTG AAAATGGTCA ACATAAAGAC AGCTATATGC CGGGTATGGA ATTACATGCC
AAATACACCG TATTTTCAGA AGGCTGTCGT GGCCATCTAG GTAAACAACT GATCCAAAAA
TACCATTTAG ACAATGGTAA AACACCACAA CATTATGGCT TAGGCTTTAA AGAAATTTGG
AAAATCCCTG CTGAACAACA TCAGCAAGGT AAAGTGGTTC ACACTGGTGG TTGGCCACTC
GTGAATGGCT CATCTGGTGG TGGCTTCCTA TATCATATGG AAGACAACCA AGTTGCTGTA
GGGTTAATTA TCGACTTAAA TTATAAAAAC CCTCACCTCA GCCCATTTGA TGAATTTCAG
CGCTATAAAA CTCACCCTGT AATTGCCGCA ACTTTAACGG GCGGAGAGCG ATTATCTTAT
GGTGCACGAG CCATTGCCAA AGGTGGTTTA AACTCACTAC CGAAAATGAG CTTCCCTGGC
GGTTTAATTA TTGGTTGTAA TGCGGGCACA CTTAACTTTG CTAAAATCAA AGGCACGCAT
ACAGCTATTA AGAGCGGTAT TATTGCGGCA AAAACCTTAG GTGAAGGCTT AATTGCCGGA
CTAGAAGGTG GCAAAGATCT TGACTGTTTC CAAGACCGTT TCGAAAAAAG CTGGCTTCAT
GAAGAGCTTT ATAGCTCACG CAACTTTGGC CCGGCCATGC ATAAGTTTGG TACGCTACTC
GGTGGCGCCT TTAACTATAT CGACCAAAAT TGGTTTGGTG GTAAGTTTCC GGTGACCTTT
AGAGACACCA CTCCAGATTA TGCCACGATG GGGCTAGCGA GCGATTACAA TAAAATTGAC
TATCCTAAAC CTGACGGCAA GTTGAGTTTT GATAAGTTAT CGTCGGTATA TCTGTCGAAT
ACTTTTCATG AAGAAGATCA GCTGTGTCAT TTACATCTAA AAGACCAAAG CATCCCAATA
TCGGTAAACT TAGTTAAATT TGATGAACCC GCGCAACGTT ACTGTCCTGC CGGTGTTTAT
GAAGTGGTTG AAGAAGCCGG TGACAAAAAA TTTGTGATTA ATGGTCAAAA TTGCATTCAT
TGTAAGACCT GTGACATTAA AGACCCAAGC CAAAACATTA CCTGGGTCAC ACCAGAAGGC
GGCGGCGGGC CAAACTATCC AAATATGTAA
|
|---|
| Protein sequence | MERESMEFDV VIVGAGPAGL ATACRLMQIS KDADKEITVC VVEKGSEVGA HILSGAVFEP
DVLDELFNDW RDSDIPLTTK VTHDEIYLLN SETQSRLMPN SLVPKTMHND GNYIISVGNL
ARWLANRAEA MGVEIFPGFA ASELLFNEDN SVKGILIGDM GVGENGQHKD SYMPGMELHA
KYTVFSEGCR GHLGKQLIQK YHLDNGKTPQ HYGLGFKEIW KIPAEQHQQG KVVHTGGWPL
VNGSSGGGFL YHMEDNQVAV GLIIDLNYKN PHLSPFDEFQ RYKTHPVIAA TLTGGERLSY
GARAIAKGGL NSLPKMSFPG GLIIGCNAGT LNFAKIKGTH TAIKSGIIAA KTLGEGLIAG
LEGGKDLDCF QDRFEKSWLH EELYSSRNFG PAMHKFGTLL GGAFNYIDQN WFGGKFPVTF
RDTTPDYATM GLASDYNKID YPKPDGKLSF DKLSSVYLSN TFHEEDQLCH LHLKDQSIPI
SVNLVKFDEP AQRYCPAGVY EVVEEAGDKK FVINGQNCIH CKTCDIKDPS QNITWVTPEG
GGGPNYPNM
|
|---|
| |