Gene Sfri_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0073 
Symbol 
ID4278157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp87004 
End bp88191 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content45% 
IMG OID638132814 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_748774 
Protein GI114561261 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAACC AAAAGGCAAC AATTATGCTT AATTTTGATT ATCGTAACCC TACTCATGTT 
GTTTTCGGTA AAGACCGTAT TGCAGAGTTA GACCAACTTG TCCCAGAAAA TGCAAGAGTA
TTAATCACTT ACGGTGGCGG CAGCGTACAA CGTTTCGGCA CACTAGATAA AGTTAAAGCA
GCATTAGGTA ACCGCACAGT ATTTGAATTT GGCGGTATTG AAGCTAACCC TAAGTACGAC
ACACTGATTA AAGCAGTTGA AGTTGCTCGT AAAGAAAATA TCGACTTCTT ACTCGCTGTT
GGCGGTGGTT CAGTGATGGA CGGCACCAAG TTTATTGCTC TAGCCACTCA GTTTGACGGC
GACACGGCAA GCTTATTACA TCACGGCTTT ACACCTGTTC CAGTTGCTAA TGACAAGGTT
ATTCCACTTG GCGTTATTGC GACCCTGCCG GCTACGGGTT CAGAAATGAA CGCCTTTGCA
GTCGTAAGCT ATCAAGGTGG TAAGTTCCCA GTAAACCACC CATGTGCTTA CCCAACATTT
GCCATGCTTG ACCCTGAATT GACCTTCAGC TTACCAAAAA TCCAAGTCGC AAACGGTGTT
GTCGATGCGT TTGTACATGT ACTTGAGCAA TATGCGACTT ACCCAGTTGA TGCCCGCGTA
CAAGACCGCA TGGCAGAAGG TATTATGCGT ACCCTCATTG AAATTGGCCC AATCACTGTT
GAAGAGCCAA CAAACTATGA TGCCCGTGCC AACTTAATGT GGAGTGCTAC ATCTGCCTTA
AATGGCATGA TAGGCACAGG CGTGCCGTTA GATTGGTCTA CTCACATGAT TGGTCATGAA
CTAACCGCAC TATTCCATAT CGACCACGCA CAAACGCTAG CCGTTGTATT GCCATCATTA
TGGCGCGTGT TGAAAGAGCA AAAACACGCT AAATTAGTGC AATACGCAGC ACGTGTTTGG
GATATCACTG AAGGTGATGA AGCGAGCCGT GTAGATCAAG CCATTGATAA AACAGAGGCT
TTCTTCAAGC AAGTGGGTTT ACCGGTACGT TTACGCGATC ACGGTGTAAC GCAAGAACAA
CTTGGCCTAG TAGTAGATGC TTTAGAAGCA CATGGTATGA CGGCATTATC TGAAAGCGGC
AAAGTCGATT TAGCCACCAG CCGTAAGATT TTAGACATGG CGTGGTAA
 
Protein sequence
MLNQKATIML NFDYRNPTHV VFGKDRIAEL DQLVPENARV LITYGGGSVQ RFGTLDKVKA 
ALGNRTVFEF GGIEANPKYD TLIKAVEVAR KENIDFLLAV GGGSVMDGTK FIALATQFDG
DTASLLHHGF TPVPVANDKV IPLGVIATLP ATGSEMNAFA VVSYQGGKFP VNHPCAYPTF
AMLDPELTFS LPKIQVANGV VDAFVHVLEQ YATYPVDARV QDRMAEGIMR TLIEIGPITV
EEPTNYDARA NLMWSATSAL NGMIGTGVPL DWSTHMIGHE LTALFHIDHA QTLAVVLPSL
WRVLKEQKHA KLVQYAARVW DITEGDEASR VDQAIDKTEA FFKQVGLPVR LRDHGVTQEQ
LGLVVDALEA HGMTALSESG KVDLATSRKI LDMAW