Gene Sfri_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0070 
Symbol 
ID4277665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp83717 
End bp84376 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content39% 
IMG OID638132811 
Producthypothetical protein 
Protein accessionYP_748771 
Protein GI114561258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.979731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA TATTACCCCT AGTCACTTTG CTTAGTTGTG TTGGTAGCGC ATCAGCGCAC 
CAACTTTCAT TTAATGAGCT CACACCAGTC AGCACGGCGA TTAAAACCGA AATCACTTTT 
GAATTGAGCG AGATGGATAT GATTAAACAG TATCATTACC GTGCTCAGTA CTTTGATATT 
GAAAAGTGGA TGACGAATAA ACAACTGACA TTACACAATG ATCATGCAGC TGCAACAAAT 
GGTGCACCGC AGTCGATGAA TACTCGTCAG ATGCAGCAAC CGGAAGTTGA AATAGATGAT 
TTAGGTGGTT TTCATGGTGT GATAGACCCA TTCATGAAGC TACAAGACAA TAATGTTAAT 
TCACCCGATC TTAATAGCGT GACAAATCGA ATCAATATCG CAGGACTTGT GGCTGTATCG 
ATGTGTAATG CTTACGCTTC GATTAATATC AAAGATCAAA ACAATAATCT AATGCCAAAG 
TTTATTGCAC CCAATAGCTT TTTAGTGGGA ATAGACCCTG CGACAGCACA ACAAAGTGAT 
TATTCGTTAT CCGAAGGAAT AAAATTTAGT TGTGTGTATA AAAATGTACT CAAGCCAGTA 
GTCAGAGACA GTGTACGCGA CATGAAACTA CAACAACCAT TACTCAAAAA AGGCGGGTAA
 
Protein sequence
MKYILPLVTL LSCVGSASAH QLSFNELTPV STAIKTEITF ELSEMDMIKQ YHYRAQYFDI 
EKWMTNKQLT LHNDHAAATN GAPQSMNTRQ MQQPEVEIDD LGGFHGVIDP FMKLQDNNVN 
SPDLNSVTNR INIAGLVAVS MCNAYASINI KDQNNNLMPK FIAPNSFLVG IDPATAQQSD 
YSLSEGIKFS CVYKNVLKPV VRDSVRDMKL QQPLLKKGG