Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0069 |
Symbol | |
ID | 4277664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 82458 |
End bp | 83498 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638132810 |
Product | hypothetical protein |
Protein accession | YP_748770 |
Protein GI | 114561257 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTATAC TCAAAAAAAC ATTAATCAGT ATGTGCCTAA TGAGCGCATC TGGTATGGTC GCAGCAACCC CAATAACCGC TAACGTTACC GCAGACAATG ATTTCATTGT GGTACATTCA CCAGGTAATG GTAGTTCACC TACTGTGGTA TATCGTGGTG CGAATGGCAG TAATTGGAAA AAAATTGAAT CACTCAAGTT CGATATCGAC AACTCAGCAC AATCACTAGA AACCTGTTCA GTCAGTGTTA TTGCATGGGG GGATGGTAAA GTGTCACAGG GTATGGCGGC TATTTTTAAA GGCGATAGCA CGATTTATAC CGGCTCAGGA CATTTTAAAG CACACCAATC TTCGACGCCA TCGTCTGGTT GGGCACAAAC AGGCGGACCT AATGCAAGTC AAATTAATAC ATTAATTGCG GACTCGTTAG CTAATGGCCA ATCACCTTAC CTGTTGCCTG GCTCTGTCGC AGGAGGCACT TCACCCTGGG GGACGATGAA CTTCCCTCTA GCCAGTAATG TCAATGTGAA TAATTTTCGC TGGGCATGGT CGACAAGTAA TTTAGCCCAA AAAACCTATT CTGTATTTAC CGCTGCCTGT GGGGATATCG TTGAAGCGGC ACCGGTTGCT GTCCATATGC CTGGAGAACA CTTCCAATGT TATGGGGTGC GAAAAGCAGA TAAACTTCGT GAAGAAACCA TTATGATAGA AGATCAATTT GGTAAAACCC GTGCAGTGCT AGGCAAGCCG GTATTGCTGT GTAACCCTTC AAGTAAAATT CATAATGAAA AGCTTTATAA AATTCGTGAT GAAGAGCGCC ATTTGGTGTG TTATGACTTT GTAAAGCAAA ATAAAGTCAA AAGCCGTAAT CTTGAGATCA ATAATCAGTT CGCACCCGAT GAACTAATGA ATGATCAACG AGAGCTGTTC TGTGTACCGT CGAGTAAGAA GCACTTAGGC CCAATTAAAC CAAATAAACC TGGTAAGCCA ATTCCACGAG AAATGCAAAG AGCTGAAATG AAACCATTGA AGCAGCGATA A
|
Protein sequence | MSILKKTLIS MCLMSASGMV AATPITANVT ADNDFIVVHS PGNGSSPTVV YRGANGSNWK KIESLKFDID NSAQSLETCS VSVIAWGDGK VSQGMAAIFK GDSTIYTGSG HFKAHQSSTP SSGWAQTGGP NASQINTLIA DSLANGQSPY LLPGSVAGGT SPWGTMNFPL ASNVNVNNFR WAWSTSNLAQ KTYSVFTAAC GDIVEAAPVA VHMPGEHFQC YGVRKADKLR EETIMIEDQF GKTRAVLGKP VLLCNPSSKI HNEKLYKIRD EERHLVCYDF VKQNKVKSRN LEINNQFAPD ELMNDQRELF CVPSSKKHLG PIKPNKPGKP IPREMQRAEM KPLKQR
|
| |