Gene Sfri_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0053 
Symbol 
ID4277648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp66651 
End bp67307 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID638132794 
Producthypothetical protein 
Protein accessionYP_748754 
Protein GI114561241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA AAGCAGAAGG TCTTCTTAAC CGTTGGGAAA TTAGGCGTCA GCGGGTTGCT 
GAAGAGGCTC AGCAAGAAGA GTTATTGCAG CAGGCACAAG AAAAGCCCGA TGACTACAAC 
ATACTTACGG CTGAATCACC TCAAGCCGTT AGCGAAATTG ATGCGGATGA GGTGGCAGAG 
CCAGAAGCAT TACCAGACCC AAACACGATT GAAGTTGGCG GCAGTTTTGC CCGCTTTATG 
GCCAAAAGTG TCGATCCAAC CACTAAAGCT GCTGCGCTAC GAGCATTATG GAAACAGCCG 
CAATATGGTC ATATCGATGG GTTACTTGAA TATGCGCTGG ATTATACCAA TCAACCGCTA 
TTGTCAGCGG ATGTATCCGC CGAGTTGGCC AGTAAAGTGT TTAGATATGT CATTGAAAAA 
GAAAAGCCTG AGCCAGAATT AGACGCGGAC TTAGCGCCAA CTGACATAGC CGATCAAGCT 
GAATTAGCAT CAAACGAATT AGCCGAACAA ACCGACTCGA TAGCCGAAGA GGACTCAATC 
GATTTAGCCG ATAATGATGC AACAACAACT GCGGCGTTAT CGCAACCAGA ACAACCGCTT 
TACCAGAATG ATGATCTGCT AAAGCAAGCT GTCGCCAGTG ATGAGGCGAA AGCGTAA
 
Protein sequence
MSDKAEGLLN RWEIRRQRVA EEAQQEELLQ QAQEKPDDYN ILTAESPQAV SEIDADEVAE 
PEALPDPNTI EVGGSFARFM AKSVDPTTKA AALRALWKQP QYGHIDGLLE YALDYTNQPL 
LSADVSAELA SKVFRYVIEK EKPEPELDAD LAPTDIADQA ELASNELAEQ TDSIAEEDSI 
DLADNDATTT AALSQPEQPL YQNDDLLKQA VASDEAKA