Gene Sfri_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0052 
Symbol 
ID4278259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp66187 
End bp66654 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content49% 
IMG OID638132793 
Producthypothetical protein 
Protein accessionYP_748753 
Protein GI114561240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACACA CCGACACGAT TTGGCCAATG TACGTTTCAT TGAAAAAGGT TCAAACCCAA 
GTTGGGCGCT GGACATCTGT TCGCTGGGAG CTGGATCAAA TGGTTCCAGC AACAGAGCCG
CAACCAGACA ATTCTGTTTT GGTGCCACTG GAATTGTACA AAGATCAACG TGGTAGTTAT
CGCATCAATC TCGATATGGA TAATGCAACA CTCTTCATTG TGTGCGACGA ATTGATTGAT
GGCACATGGG TGCCTGCGAT GATCTCTGCC GACCAACACG TGAGTGCCGG TTGCTTAGAG
TCAGATACAC CAGTGCTCAA TATTCCAATG CCTAGCGCCG TTGCCTGTTG GATAGAGGCA
TTCATCACTC GTCACGGCGA AGTGGAAATC AGCGCTCATA GACGCAAGCA TGTTAACCGC
CGTAAAAATG AAGGGCCGAG CGCGAATCGC TCAGGAAATA TGCAATGA
 
Protein sequence
MQHTDTIWPM YVSLKKVQTQ VGRWTSVRWE LDQMVPATEP QPDNSVLVPL ELYKDQRGSY 
RINLDMDNAT LFIVCDELID GTWVPAMISA DQHVSAGCLE SDTPVLNIPM PSAVACWIEA
FITRHGEVEI SAHRRKHVNR RKNEGPSANR SGNMQ