| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0051 |
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| Symbol | |
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| ID | 4278258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 64986 |
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| End bp | 65840 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132792 |
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| Product | formate dehydrogenase, subunit FdhD |
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| Protein accession | YP_748752 |
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| Protein GI | 114561239 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAT CTGTTTCAGC CACATCTTTG CAGCGCAATG CAATAAAATT TGTTAAAACC
AACACTCAGG TTCCGCTCAC CATTGCAGTT AAAGCCATCA ACGAACAAGG CCAGGTCGTC
GATAAATTTG TCGCCTGCGA ACGACCATTA ACCGTGTATT TAAATTGGCG CCCTATCGTA
ACCTTAATGA CATTGGGGGC TAAACCAGAG TCACTCACTA TTGGCTACTT AAAAAACCAG
GGGTTTATTA GCGAGTTAAG TCTATTAGAG TCGGTTATCG TTGATTGGGA AGTCAGTTCT
GCGGCGGTGA TTACCCAAGA GGTTTCTGAA GATATTGAGC AGAAATTGTC TGAAAAAACG
GTGACGTCAG GTTGTGGCCA AGGCACTGTT TACGGTGGAT TTTTACAAGG CTTAGATGAG
ATTGATTTAC CTACTCCATC ACTCAAACAA TCGACTATTT ATGCCTTACT CGGCAATATC
AATGCTTACA ATGAAACCTA TAAAAATGCC GGCGCTGTGC ATGGTTGCGG AATATGCCAA
GACGAACAAA TTTTAGCATT TGTTGAAGAT GTTGGCCGCC ACAATGCCGT TGATACGTTG
GCGGGAGATA TGTGGTTAGA TCAGCAATCG GGACACGATA AGATTTTCTA CACCACAGGT
AGATTAACGT CAGAAATGGT TATCAAAGTC GCTAAAATGG GCATACCTGT ATTGTTGTCA
CGCAGTGGCG TTACCCAAAT GGGCCTAGAT TTGGCCATGC AGATGGGTAT TACCTTAATA
GCTCGTGCAA AAGGGCGACA TTTTTTGGTA TATCACGGCA GTGAAACAAT TGAGTTTGAT
GCCACTAAAG ATTAA
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| Protein sequence | MTQSVSATSL QRNAIKFVKT NTQVPLTIAV KAINEQGQVV DKFVACERPL TVYLNWRPIV
TLMTLGAKPE SLTIGYLKNQ GFISELSLLE SVIVDWEVSS AAVITQEVSE DIEQKLSEKT
VTSGCGQGTV YGGFLQGLDE IDLPTPSLKQ STIYALLGNI NAYNETYKNA GAVHGCGICQ
DEQILAFVED VGRHNAVDTL AGDMWLDQQS GHDKIFYTTG RLTSEMVIKV AKMGIPVLLS
RSGVTQMGLD LAMQMGITLI ARAKGRHFLV YHGSETIEFD ATKD
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