| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0040 |
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| Symbol | |
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| ID | 4278247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 51337 |
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| End bp | 53145 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638132781 |
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| Product | hypothetical protein |
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| Protein accession | YP_748741 |
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| Protein GI | 114561228 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTGC GGATCCTACC GGCACTGATA ATGTTAAGTT TATTGGGTTG TAATAGTCAT
TCAACCACGA CACAGATTGC GCCTCAAGTC ACTCACCAAC AAACGCAGAT AGATAACGAT
CTACAAGCGA TTATAGACCA GAGTTGGGCG GTTAATTTAG CTTTCTCACC GGAGTTAGCC
GCCAGTTTAG GAGATGCATC AGTAGCCGCA AAGCTTGATG ATTTATCTGC AGAAACATTA
GCAGAAAAGA ACCAACAGAC GCTCCAAATT CTCCATACAC TTAAGCAGCT TGACCGGAAA
AACTTATCCA AATCAGATGT CATCAATGCT AAGATTTTAC AAGACCAGCT ACAAAACGAA
GTCGACATGT ATCGATTTCA TGACCACTAT TTACCCATAA CAGCTGAAAG TGGTTTTCAT
GCTTATATTG CGTCTATTGC TAAAGCTCGC TTCAATAGTA TTGAAGATTA TCAGCACTAT
TTAGCTAAAC TTAAGCAATT ACCACGTTAT TTCGCGCAAC AAACATATTG GCTCAAACAA
GGTTTAGCCA GCGGTATTAC TCCGGCAAAA ATCACCCTTA ATGGATTCGA AGACAGTATT
AGCGCATTTA TTGTTCCAGT TGAGAGCAGC GGCTACTTTA CTCCGTTTAC CCATTATCCT
GATCATTTTA GCGCAACAGA AAAAAATACG CTGACCCAAC AAGGCAGAAC AACCGTAGAA
CAAATCGTGC TTCCTCTGTA CCAACAGTTT TATAATTTCA TGACTGAGGA ATATATTCCC
AACGCAAGAA TAGACATCGC GGCTTCGGCT TTACCAGATG GCGCGGCGTT TTATCAAAAC
AGAGTTGAGT ATTACACCAC GCTGCCAATG ACAGCTGAAC AAGTCCATCA ACTTGGATTG
CAAGAAGTTG CTCGTATAAG ATCAGAAATG GAACAGGTGA TTAAAGATGT TGGCTTTAAA
GGCAGTTTTG CTGATTTTTT AATGTTTTTA CGCACGGATC CAAAGTTTTA CCCTAAAACC
GCTGATGAGT TACTTAAAGA AGCAGCATTT ATTGCCAAAA AAGCAGATGC CATGTTGCCT
AAGTATTTCG GCAAATTACC GCGCACACCT TATGGTATTG CACCGGTACC TGCTGAAATT
GCGCCTAAAT ACACTACAGG GCGCTACTCG GGTTCAAACC GTGACGACGA GCCTGGCTAT
TATTGGGTTA ACACCTACGC CTTAGATAAG CGACCGCTAT ACGAGCTTGA AGCCTTAACC
CTACATGAAG CAGTGCCAGG GCACCATTTA CAGATATCAC TCAATAAAGA ACTCACTGAC
TTACCCAATT TTAGACGCTA CAGTTATATC TCTGCATTTG GTGAAGGCTG GGGCTTATAC
TCAGAATATT TAGGCTTAGA AGCCGGCTTT TATCAAGATC CATACAGTAA CTTTGGCCGC
TTAACCTACG AAATGTGGCG TGCGGCTCGT TTAGTCGTCG ATACGGGCAT GCATGCAAAA
GGTTGGAGCC GCCAACAAGC GATAGATTTT ATGGCAAGTA ACACAGCACT TTCAATGCAC
AACGTTACTA CTGAAATAGA TCGCTATATT TCTTGGCCAG GCCAAGCGTT ATCGTACAAA
ATTGGTGAAT TAACCATAAA ACGGTTACGC GCTAAGGCTG AAAAATCATT AGGGAAAGAC
TTTGATATTC GGAAGTTTCA TGATGCCATT TTAGAAAATG GTTCTATTCC AATGTCGGTG
CTAGAACAAA TGGTCGATGA GTTTATAGCT CGCCAAAAGG CGACAATAAA ACAAGCAAGT
ACCGGATAA
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| Protein sequence | MRLRILPALI MLSLLGCNSH STTTQIAPQV THQQTQIDND LQAIIDQSWA VNLAFSPELA
ASLGDASVAA KLDDLSAETL AEKNQQTLQI LHTLKQLDRK NLSKSDVINA KILQDQLQNE
VDMYRFHDHY LPITAESGFH AYIASIAKAR FNSIEDYQHY LAKLKQLPRY FAQQTYWLKQ
GLASGITPAK ITLNGFEDSI SAFIVPVESS GYFTPFTHYP DHFSATEKNT LTQQGRTTVE
QIVLPLYQQF YNFMTEEYIP NARIDIAASA LPDGAAFYQN RVEYYTTLPM TAEQVHQLGL
QEVARIRSEM EQVIKDVGFK GSFADFLMFL RTDPKFYPKT ADELLKEAAF IAKKADAMLP
KYFGKLPRTP YGIAPVPAEI APKYTTGRYS GSNRDDEPGY YWVNTYALDK RPLYELEALT
LHEAVPGHHL QISLNKELTD LPNFRRYSYI SAFGEGWGLY SEYLGLEAGF YQDPYSNFGR
LTYEMWRAAR LVVDTGMHAK GWSRQQAIDF MASNTALSMH NVTTEIDRYI SWPGQALSYK
IGELTIKRLR AKAEKSLGKD FDIRKFHDAI LENGSIPMSV LEQMVDEFIA RQKATIKQAS
TG
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