| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0039 |
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| Symbol | |
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| ID | 4278246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 50300 |
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| End bp | 51274 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638132780 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_748740 |
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| Protein GI | 114561227 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.302219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATTACA TGAAATTTTC ATCTGAATTA AAGCTCGATA CTAGTGAGCA AAGACACTTT
TGGCAACAAG TACACCAATC GAGTTTTTGT ACTGATGACG GTATAAATAT TGCCTATGCG
ATGATCCAAC ATCCTAATAG TCAACGAGCA ATAGTGATCA GCAATGGCAG AGTAGAATCT
TATATAAAAT ATCAAGAATT GATGTTTGAT TTATATCAAC AAGGATTTAG CGTTTACGCT
TTAGATCATC GAGGACAAGG ATTATCAGAC CGGCTCACAC ATAATCCGCA TCAAGGTTAT
GTTGCTAGCT TTACTGATTA TACCGAAGAC TTAACTCAAT TTATTAATCA GATAGTTAGC
CAACAACAGC ATGATGAGCT ATTTATCATC GCTCACTCAA TGGGATGCAC CATTGCCAGC
GATTATATTA ATCAACACCC AAATACATTT ACTGCAGCCG TATTCTCAGC GCCCATGTTT
GGTATTCGAT TACCGTTTAC AAAACCTATC ATTCGTTGGC TAGCACAAAA GCTCGATAAT
AATCGTCTGG AAGCAAATAA AGTACACAGC ACATTTGTAA TAGGGGGAAC CCATTACAAA
CCCGACAGCT TTAAACGCAA CCGACTGACT CATAGCCAAA AACGTTATAA GCACTATCGC
AACATCTTCG AAGAAACCAC TAAAGCACAG TTAGGCTCAC CGACTAACCA TTGGTTACTA
GAGGCAATGG ATGCAGCGGA GAAATGCATC GACTACGCTA AACACAGCCA AACTCCGATA
CTAATTTTGC AAGCTGAAAA AGACACGATT GTCTGTAATG AGGCGCAAAA CCAAGCACTA
AGCACTCATT GTCATAAAGT GATCATTGAA GGCGCATATC ACGAAGTATT CATCGAGAAA
GATACTATGC GTAATATCGC CCTGTCTCAT ACCATTGACT TTATGGCACA ACACTCAAAG
ATAGCTGTGT CTTAA
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| Protein sequence | MHYMKFSSEL KLDTSEQRHF WQQVHQSSFC TDDGINIAYA MIQHPNSQRA IVISNGRVES
YIKYQELMFD LYQQGFSVYA LDHRGQGLSD RLTHNPHQGY VASFTDYTED LTQFINQIVS
QQQHDELFII AHSMGCTIAS DYINQHPNTF TAAVFSAPMF GIRLPFTKPI IRWLAQKLDN
NRLEANKVHS TFVIGGTHYK PDSFKRNRLT HSQKRYKHYR NIFEETTKAQ LGSPTNHWLL
EAMDAAEKCI DYAKHSQTPI LILQAEKDTI VCNEAQNQAL STHCHKVIIE GAYHEVFIEK
DTMRNIALSH TIDFMAQHSK IAVS
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