| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0033 |
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| Symbol | |
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| ID | 4278310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 37008 |
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| End bp | 38264 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132771 |
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| Product | amidohydrolase |
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| Protein accession | YP_748734 |
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| Protein GI | 114561221 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000676749 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTAT TTAAAAAATC TGCACTTGCT TTAAGTTTAT CGGTCGGCCT AGCATTGAGT
TGTGTGGTTC AAGCTGAAAG CATAGCAATT ATCCATGCCA CAGTGTATAC CGCCACAGAA
CAAGGCGTAC TAACAGATGC CACAGTTGTG ATTGAAGACG GCACTATTGT AGCCATTAAT
CCGGCATCAC CGACAGCCGA TACCGTGATA GATGCTAAAG GGGCAATATT AACTCCAGGC
TTTATCGCGA GTATGAATGA TTTAGGGTTA GTAGAAATCG GTGCGGTAGC CTCTTCACGT
GATGCTTACG AAAAAGAAGC TGATGTCATT TTTGATCCTA GTTTAGCTTA CAACCCCAAG
GCATCCACGG TGCCATTTAC TCGCAAAGGC GGAATAACTC GTAATGTAGT GTCATCTGGC
GGTGGCGAAG GCATTTTTGC CGGACAAACA TTTACTGTAG ATTTAAGTGG TGATTGGGAC
AGTATACTGG CCGCTAACAC CGGATTAGTG GTTGCATTAG GTGCGATAGA AGAAGGCTCG
CGTGCTGCAG GAATGCAGCA ATTGATCCAT AAACTTGAGG ATGCTAAAAA AGCGCAAGCC
AAAAAGAGTA AAGCGAAAAA AACAGCTGAC GATGATAGTG ATGTACCAAG TCGTGAAGAT
GATATTATTA ACGCGGTACT CGCGGGTGAA AAACCATTAA TTATCGCAGT AGACCGTGCC
AGTGATATTT TGCATTTAAT TAAGCTTAAA CAAGACTTGA GCATAGACCT TGTTTTGGTC
AATGCAGCTG ATGCCGTATT AGTGGCGGAT AAGCTCGCGC AAGCAAATAT CCCTGTGGTT
ATTGATAGCA TGCGTAACTT ACCAGAAAGT TTTGATTCGT TGCATAATTC ACTCGAAAAT
GCAGGTAAAC TAGCAAAAGC GGGTGTCAAA GTAGCCATTG CTTTACCGGG TGATAGCCAT
GGTATTTACG CACTCCGTTT TAGTGCCGGT AATGCGGTTG CTAACGGGAT GAACTATGAA
GATGCTCTGG CTTCTGTGAC GGCAAATGTG GCTGATATTT TCCATTTAGA CTCCGGGCGT
ATTGCGGTCG GTAAGCCAGC AGATTTAGTG TTATGGAGCG GTGATCCTTT CGAGTTCAGT
AGTAAAGTAC AAAAGATGTG GATTGCAGGA GAGGAGCAAA GCACTGACAG TCGTCAAGAC
AAGCTCCGTG ATCGCTATTT ACAAAAAACA GCAATGCCTG AAGCATATAG CCGATAA
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| Protein sequence | MTLFKKSALA LSLSVGLALS CVVQAESIAI IHATVYTATE QGVLTDATVV IEDGTIVAIN
PASPTADTVI DAKGAILTPG FIASMNDLGL VEIGAVASSR DAYEKEADVI FDPSLAYNPK
ASTVPFTRKG GITRNVVSSG GGEGIFAGQT FTVDLSGDWD SILAANTGLV VALGAIEEGS
RAAGMQQLIH KLEDAKKAQA KKSKAKKTAD DDSDVPSRED DIINAVLAGE KPLIIAVDRA
SDILHLIKLK QDLSIDLVLV NAADAVLVAD KLAQANIPVV IDSMRNLPES FDSLHNSLEN
AGKLAKAGVK VAIALPGDSH GIYALRFSAG NAVANGMNYE DALASVTANV ADIFHLDSGR
IAVGKPADLV LWSGDPFEFS SKVQKMWIAG EEQSTDSRQD KLRDRYLQKT AMPEAYSR
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