Gene Sfri_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0032 
Symbol 
ID4278309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp35614 
End bp36996 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content44% 
IMG OID638132770 
Productamidohydrolase 
Protein accessionYP_748733 
Protein GI114561220 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000114541 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGT TAATGCCTTC TTTGGTAGCT GTGGCGCTAT CAACTGCAAT AGCAGGTTGT 
AGCCCAGCAG AACAACAAGA GCCAAAAATC ACAATCAATG CCAATCCGTA TCCAAGTACT
TATCAAATAC TGCCTAATTC AACCACGCTG CTTAAAAATG CCATTGTATT AACCGGTACT
GGTGAGCGTA TTGATGATGC TGATGTATTG ATAAAAGACG GCAAAATTAG TGCTGTAGGT
CAACAGCTTT CCGCTGAAGG TGCTGTAGTT GTTGACGCTA AAGGCAAATG GATTACCCCA
GGTATCATTG ATGTGCATTC ACACTTAGGG GTTTATCCAA GCCCTAATGC CGAGTCACAC
AATGACGGCA ATGAAATGAC TAGCCCGGTA ACCGCTGAAG TATGGGCTGA GCATAGTGTA
TGGCCGCAAG ATCCTGGATT TAACCGTGCC CGAGAAGGTG GTATCACCAC GCTACAGATT
TTACCAGGCT CAGCTAACCT TATTGGTGGT CGTGGGGTCA CGCTCAAAAA TGTCCCCGCG
ACAACCATGC AAGCGATGAA ATTTCCTGCC GCGCCGTATG GATTAAAAAT GGCCTGTGGT
GAAAACCCTA AATCTTTATA TGGTAGCCGT AACGAATTAC CCATGACACG TATGGGTAAT
ATGGCGGGCT ACCGCACGGC ATTTATTCAA GCCACAGAAT ACAAACGTGC TTGGGATAAA
TATGATGCTG AATACGCCGC TGGTAAGAAC CCTGTAGCAC CTAAGCGCGA CTTAATGAAA
GACACGCTTA AAGGTGTGCT TGAAGGTGAT ATTTTAATTC ATAACCATTG TTACAAAGCT
GAAGAAATGG CGATGATGAT CGATCTAGGT AAAGAGTTCG GTTATCACGC TGGCACATTC
CATCATGCTG TTGAAGCATA CAAAATTGCC GATTTATTGG CTGAAAATGG TAACTGTGCA
GCTATGTGGC CAGATTGGTG GGGCTTTAAA TTAGAAGCTT ATGACATGGT GCTTGAAAAT
GTTGCCATGG TCGATGCGGT TAAAAACTCT TGTGCTGTCG TACATTCAGA CTCTGGCGTA
ACCATTCAGC GCCTTAATCA AGAAACGGCA AAAATCATGA ATAACGCGAA TGATAACGGC
TTTGACTTAA AAGCTGAGCA CGTAATTGGT TGGATTACTG CTAATGCGGC AAAATCATTG
GGTATTAGCG ATAAGACCGG TTCACTCGAA AAGGGTAAAA ATGCAGATGT GGTTGTATGG
AATACCAACC CGTTTAGCGT ATACGCCCAA GCTGAACAGG TATTTATTGA TGGTGCAAAA
GTGTATGACC GCCAAGATCC TGCCTACCAG GCACAAAGTG ACTTTATGTT AGGTCAACAA
TAA
 
Protein sequence
MAKLMPSLVA VALSTAIAGC SPAEQQEPKI TINANPYPST YQILPNSTTL LKNAIVLTGT 
GERIDDADVL IKDGKISAVG QQLSAEGAVV VDAKGKWITP GIIDVHSHLG VYPSPNAESH
NDGNEMTSPV TAEVWAEHSV WPQDPGFNRA REGGITTLQI LPGSANLIGG RGVTLKNVPA
TTMQAMKFPA APYGLKMACG ENPKSLYGSR NELPMTRMGN MAGYRTAFIQ ATEYKRAWDK
YDAEYAAGKN PVAPKRDLMK DTLKGVLEGD ILIHNHCYKA EEMAMMIDLG KEFGYHAGTF
HHAVEAYKIA DLLAENGNCA AMWPDWWGFK LEAYDMVLEN VAMVDAVKNS CAVVHSDSGV
TIQRLNQETA KIMNNANDNG FDLKAEHVIG WITANAAKSL GISDKTGSLE KGKNADVVVW
NTNPFSVYAQ AEQVFIDGAK VYDRQDPAYQ AQSDFMLGQQ