Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0032 |
Symbol | |
ID | 4278309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 35614 |
End bp | 36996 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638132770 |
Product | amidohydrolase |
Protein accession | YP_748733 |
Protein GI | 114561220 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000114541 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGT TAATGCCTTC TTTGGTAGCT GTGGCGCTAT CAACTGCAAT AGCAGGTTGT AGCCCAGCAG AACAACAAGA GCCAAAAATC ACAATCAATG CCAATCCGTA TCCAAGTACT TATCAAATAC TGCCTAATTC AACCACGCTG CTTAAAAATG CCATTGTATT AACCGGTACT GGTGAGCGTA TTGATGATGC TGATGTATTG ATAAAAGACG GCAAAATTAG TGCTGTAGGT CAACAGCTTT CCGCTGAAGG TGCTGTAGTT GTTGACGCTA AAGGCAAATG GATTACCCCA GGTATCATTG ATGTGCATTC ACACTTAGGG GTTTATCCAA GCCCTAATGC CGAGTCACAC AATGACGGCA ATGAAATGAC TAGCCCGGTA ACCGCTGAAG TATGGGCTGA GCATAGTGTA TGGCCGCAAG ATCCTGGATT TAACCGTGCC CGAGAAGGTG GTATCACCAC GCTACAGATT TTACCAGGCT CAGCTAACCT TATTGGTGGT CGTGGGGTCA CGCTCAAAAA TGTCCCCGCG ACAACCATGC AAGCGATGAA ATTTCCTGCC GCGCCGTATG GATTAAAAAT GGCCTGTGGT GAAAACCCTA AATCTTTATA TGGTAGCCGT AACGAATTAC CCATGACACG TATGGGTAAT ATGGCGGGCT ACCGCACGGC ATTTATTCAA GCCACAGAAT ACAAACGTGC TTGGGATAAA TATGATGCTG AATACGCCGC TGGTAAGAAC CCTGTAGCAC CTAAGCGCGA CTTAATGAAA GACACGCTTA AAGGTGTGCT TGAAGGTGAT ATTTTAATTC ATAACCATTG TTACAAAGCT GAAGAAATGG CGATGATGAT CGATCTAGGT AAAGAGTTCG GTTATCACGC TGGCACATTC CATCATGCTG TTGAAGCATA CAAAATTGCC GATTTATTGG CTGAAAATGG TAACTGTGCA GCTATGTGGC CAGATTGGTG GGGCTTTAAA TTAGAAGCTT ATGACATGGT GCTTGAAAAT GTTGCCATGG TCGATGCGGT TAAAAACTCT TGTGCTGTCG TACATTCAGA CTCTGGCGTA ACCATTCAGC GCCTTAATCA AGAAACGGCA AAAATCATGA ATAACGCGAA TGATAACGGC TTTGACTTAA AAGCTGAGCA CGTAATTGGT TGGATTACTG CTAATGCGGC AAAATCATTG GGTATTAGCG ATAAGACCGG TTCACTCGAA AAGGGTAAAA ATGCAGATGT GGTTGTATGG AATACCAACC CGTTTAGCGT ATACGCCCAA GCTGAACAGG TATTTATTGA TGGTGCAAAA GTGTATGACC GCCAAGATCC TGCCTACCAG GCACAAAGTG ACTTTATGTT AGGTCAACAA TAA
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Protein sequence | MAKLMPSLVA VALSTAIAGC SPAEQQEPKI TINANPYPST YQILPNSTTL LKNAIVLTGT GERIDDADVL IKDGKISAVG QQLSAEGAVV VDAKGKWITP GIIDVHSHLG VYPSPNAESH NDGNEMTSPV TAEVWAEHSV WPQDPGFNRA REGGITTLQI LPGSANLIGG RGVTLKNVPA TTMQAMKFPA APYGLKMACG ENPKSLYGSR NELPMTRMGN MAGYRTAFIQ ATEYKRAWDK YDAEYAAGKN PVAPKRDLMK DTLKGVLEGD ILIHNHCYKA EEMAMMIDLG KEFGYHAGTF HHAVEAYKIA DLLAENGNCA AMWPDWWGFK LEAYDMVLEN VAMVDAVKNS CAVVHSDSGV TIQRLNQETA KIMNNANDNG FDLKAEHVIG WITANAAKSL GISDKTGSLE KGKNADVVVW NTNPFSVYAQ AEQVFIDGAK VYDRQDPAYQ AQSDFMLGQQ
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