Gene Sfri_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0031 
Symbol 
ID4278308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp35008 
End bp35442 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content44% 
IMG OID638132769 
Productglobin 
Protein accessionYP_748732 
Protein GI114561219 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0030771 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGT TACGTAAATT ATTCACTAAG CCGCAAGCTG TTGATGACAG AGACACAGCG 
CAATCAAATG CCTACGACCT CATTGGTGGC GATAAGGTGA TCCGCGCTAT TGCCCATGAC
TTTTATCAAC AGATGCAAAC GCGCCCCGAA ACCCAAGCGT TATTAGCGAT ACATCGCTCG
CCAATGCAAG AGTCTGAACA AAAACTGTAT GAGTACTTAA GTGGCTGGTT AGGAGGACCA
CAATTGTACC AACAAAAACA TGGTCATCCG GCTTTACGCG CCAGGCACAT GCCTTTTGCT
ATTGATGAAT CGATGCGAGA TCAATGGTTA ATCTGTATGC GTGCAGCCAT TCAAAACAAC
ATAAAAAAGC CTGAACATCA ACAAGTGATT ATTCAGGCTA TTTCTACACT AGCTGACACT
ATGCGTAATT GTTAG
 
Protein sequence
MNWLRKLFTK PQAVDDRDTA QSNAYDLIGG DKVIRAIAHD FYQQMQTRPE TQALLAIHRS 
PMQESEQKLY EYLSGWLGGP QLYQQKHGHP ALRARHMPFA IDESMRDQWL ICMRAAIQNN
IKKPEHQQVI IQAISTLADT MRNC