| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0022 |
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| Symbol | |
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| ID | 4278299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 27278 |
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| End bp | 28561 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132760 |
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| Product | sun protein |
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| Protein accession | YP_748723 |
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| Protein GI | 114561210 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTC GCGCACTAGC AGCTAAAGCG ATTTATGAAG TCCTTGAAAA AGGAATTTCG
TTATCGGTGG CTCTACCCGA TCAACAGCAA CACTTACAAA ATGGCAAAGA CAAAGCCTTA
TTAGCTGAAT TATGTTACGG CGTTATGCGT CAATTACCGC AACTAGACAA GTGTGTAAGT
GACTGCTTAG CGAAACCGTT TAAAGGTAAA CAGCGTATAT TGCATCAACT GCTGATAGTA
GGTTGTTACC AACTTTACTT TACCCGTATC CCAGCGCATG CGGCGATTTC AGAAACGGCA
GAAGCTTGCA GACAATTACG TTTTGATGGC TTGGTGAAAG TGGTCAATGG CGTATTGCGT
AATATTCAGC GTCAAGATAG CGAATTAAAT ACTGACTCAG ACACGCTACG CTTTAATACT
CCAGCTTGGT TTATTAAGCA TTTACAACAA GCGTATCCAG ATAACTGGCA AGACATTATT
GAGCAGAGCC ACCAGCGTCC GCCAATGTGG CTACGTAATA ATCAGCAATC ACAGACATGT
GATGCTTATT TAGCGGCACT AGCCCAACAT GATATTTCAG CCCAAGCCGG TTCAAGCCCA
AATGCTATAT TGCTCGAAAG CGCAAAAGAT GTCGCTGCAT TACCCGACTT TATGGAAGGC
GCAGCATCGG TCCAAGATGG TGCGGCACAA TGGGCTGCAA CCTTACTCGC ACCAACAGCA
GATGAACTTG TTTTAGACGC CTGCGCCGCG CCTGGTGGCA AAAGTTGCCA TTTACTAGAG
CTTGCTCCCA CTATCAATTT AGTCGCTGTC GACTTTGATC AAAAACGCCT TGCTCGGGTA
CAACAAAATC TGGACAGGTT GCATTTAAAA GCGCAACTTA TTCACGGCGA TGCGGCAGAT
ATTCCATCAT GGTGGCAAGG ACAACAATTT GATCGAATCT TGCTTGATGC ACCTTGTTCT
GCAACTGGGG TAATTCGCCG TCATCCAGAC ATAAAATGGT TACGTAAAAA TAGCGATATT
GAAGAGTTAG CCAACCTACA AAAACAGATA TTGGATCATT GTTGGCAATG GCTTAAACCG
GGTGGCACTT TATTATATGC AACCTGCTCT ATTTTACCGC AGGAAAACAG CCAACAAGTT
GAACAGTTTC TAGCACGGAC AGCCGATGCG AGTTTAGTAC CGATAGAGCA ACAAGCTCAT
ATCAGTGATA TCGGTTGGCA AATTTTGCCA GGACAAGACA ATATGGACGG CTTTTATTAC
GCGCGCCTAG TTAAAGCAAT TTAA
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| Protein sequence | MNVRALAAKA IYEVLEKGIS LSVALPDQQQ HLQNGKDKAL LAELCYGVMR QLPQLDKCVS
DCLAKPFKGK QRILHQLLIV GCYQLYFTRI PAHAAISETA EACRQLRFDG LVKVVNGVLR
NIQRQDSELN TDSDTLRFNT PAWFIKHLQQ AYPDNWQDII EQSHQRPPMW LRNNQQSQTC
DAYLAALAQH DISAQAGSSP NAILLESAKD VAALPDFMEG AASVQDGAAQ WAATLLAPTA
DELVLDACAA PGGKSCHLLE LAPTINLVAV DFDQKRLARV QQNLDRLHLK AQLIHGDAAD
IPSWWQGQQF DRILLDAPCS ATGVIRRHPD IKWLRKNSDI EELANLQKQI LDHCWQWLKP
GGTLLYATCS ILPQENSQQV EQFLARTADA SLVPIEQQAH ISDIGWQILP GQDNMDGFYY
ARLVKAI
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