Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0021 |
Symbol | trkA |
ID | 4278298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 25852 |
End bp | 27261 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638132759 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_748722 |
Protein GI | 114561209 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTA TTATTTTAGG GGCTGGGCAA GTAGGCGGCA CGTTAGCTGA AAACTTAGTC GGTGAAAATA ACGACATCAC ACTCGTCGAC AGTGATCGCG CTCGGCTAAG GCTATTACAA GACAAGTTTG ACCTACGTGT TGTTGTCGGT CATGGCGCTC ATCCGAGTGT ATTAAAAGAA GCTGGTGCAG AAGATGCTGA CATGCTCATT GCGGTAACCA ATAGCGATGA ATGTAACATG GCAGCTTGTC AAATTGCTTA CAGCTTATTT GGTACACCAA CTAAAATTGC TCGTATTCGC TCAGAAGCTT ATTTAGAACT TCAAGATAAA CTGTTTATCA ATAGTGAAAT TAAAAGCGGT GACGCTAAGC CACGTGGCGG TTTTATTATT GATGAGCTGA TTGCACCTGA GCAGTTAGTG ACCGCTTACA TACAAAGATT AGTAGAATAC CCAGGTGCAC TTCAAGTACT TGAATTTGCT AAAGGTAAGC TAAGTCTTGT TGCGGTTAAA GCTTATTATG GCGGCCCATT AGTGGGTAAC GCATTAGCCA CATTACGTGA GCACATGCCC AATATTGATA CCCGCGTAGC CGCTATTTTT AGGCAAGGCC GGCCTATCAT GCCGCGCGGC ACGACCATTA TTGAAGCCGA TGATGAGGTA TTTTTCGTCG CCGATAGTCG TCATATTCGT GCAGTAATGA GTGAGATGCA AAAACTGGAT AATTCGTACC GCAATATCAT GATTGCGGGT GGCGGTAATA TTGGTTTTGG TCTTGCGCAA AAGTTGCAAC GTACTCATTC GGTTAAGTTA ATTGAACACC GTCAAGAACG CGCGGAGTTA CTTTCAGAAA AACTGGAAAA AACCACCGTG TTTTGTGGCG ATGCTTCAGA CCAAGAATTG CTGTTGGAAG AAAATATCGA TCAAACCGAT GTGTTTATCG CTGTCACCAA TGATGACGAA GCCAATATTA TGTCTGCCCT ACTTGCTAAA CGCATGGGGG CGAAAAAGGT CATGGTACTT ATTCAACGTG AAGCCTATGT TGATATTGTG CAAGAAGCTA ACATTGATAT AGCCATATCT CCTCAGCAAG CCACCATTTC AGCGTTACTG ACTCATATTC GCCAAGGTGA TATATGTAAT GTTTACTCAT TACGCCGTGG TGCAGCAGAA GCCATTGAAG CGATTGCCCA TGGAGACTCA AGCACGTCAA AAGTTGTCGG CAAACAGATT GGCAACATCA AACTACCGCC AGGCACAACT ATTGGTGCCA TTGTACGTAA TGATGAAGTG TTAATGGGCC ATGACAAAAC GGTAATCGAA CAGGGTGACC ATGTTATTTT ATTCTTAGTG AATAAGAAGT TCATCGGTGA CGTAGAGAAA CTGTTTCAAC CAAGTGCTTT TTTCTTTTAA
|
Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITLVD SDRARLRLLQ DKFDLRVVVG HGAHPSVLKE AGAEDADMLI AVTNSDECNM AACQIAYSLF GTPTKIARIR SEAYLELQDK LFINSEIKSG DAKPRGGFII DELIAPEQLV TAYIQRLVEY PGALQVLEFA KGKLSLVAVK AYYGGPLVGN ALATLREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHIR AVMSEMQKLD NSYRNIMIAG GGNIGFGLAQ KLQRTHSVKL IEHRQERAEL LSEKLEKTTV FCGDASDQEL LLEENIDQTD VFIAVTNDDE ANIMSALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDS STSKVVGKQI GNIKLPPGTT IGAIVRNDEV LMGHDKTVIE QGDHVILFLV NKKFIGDVEK LFQPSAFFF
|
| |