| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0005 |
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| Symbol | |
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| ID | 4277688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 6233 |
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| End bp | 7285 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638132743 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_748706 |
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| Protein GI | 114561193 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.387927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTATTG GTTTCTTTAA AAAATTGTTT AATGTTCGTG ACCGCAATGA ACAGGCTAAA
TTCACTGGCA TTACCACCGC AGAAAAACGT CAACAAACCA AACCACAGAC ACCTGTACCT
GCAATTGAGG TTACGGAGCA TCAAGCTGTT GAATCACAAT TAGATCTATC GGCTTTATTT
TATAGTTTAT TGTTTGCAAC TCCATCCACT ACGACCACAG GTATTGCCAA TAATCTTGAA
CGTAGTGTAA TGCAAAATAT TGAACAGGCA TTAAGCTCAC CGCAGTCGAT TGCAGAAAAC
GTATTAAAGC TTCCCAGTAA AATACTCGAG CTTGATAAAA AACTTGGCGA CGACAATATT
GAAACCCAAG AGTTAATACT ACTTATTGAG CAAGACCCTT TGTTGTGTGT TGAAGTGCTC
AAGTTATGTA ACTCGCCCGC TTTTAAACGA GCGGATACCG ATGTTAGCAG TATTCAACAA
GCGTTAGTAC AAGTGGGCAG GCAACAATTA AGGCAATTTA TTACCGCGTG TTTAGCCCGT
GAGTTAATCG ATATAAAGCC AATTTACTTT AGACGCTTTG GGGCTGAAAT CTGGCGTCAT
TCTATGCAAG TGGCTTTTTT GGCTAGCGAG TTAGCGAGCA ACGAGCAACG AGACAGTGCT
TTTCTATTAG GCTTACTGCA TGATGTGGGT AAAATTGCGA TTTTTAAAAT GCTGGTGGAC
GCTTTTTATC AAGCTGAACC AGGAGAACAA CCCAATTCAA TACTTTTTAA GCAGGTGATG
ACCACAAAAT CGTTAACCTT AAGTGCATTG TTAGCGCGCA GTTGGCAACT CTCACAACAC
TTTGAAACAC CGTTAACGTT ATTGGCCAAT ACTAATATTA AACCAACTGA TGGCATGACA
CTGCTTATTT GGAAAGCCAA TATTATTAGT GAATGTTCAA TGCTGTTACA AGTCGACAAA
TTGCCTCAAC CAGCACTAGC GGTATTGTTA GCTCAGGTAG AGTGTAGTGA AGAAGATTTT
ATAGAATTAC ATCAAAAGCT TATCCAGTTT TAA
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| Protein sequence | MVIGFFKKLF NVRDRNEQAK FTGITTAEKR QQTKPQTPVP AIEVTEHQAV ESQLDLSALF
YSLLFATPST TTTGIANNLE RSVMQNIEQA LSSPQSIAEN VLKLPSKILE LDKKLGDDNI
ETQELILLIE QDPLLCVEVL KLCNSPAFKR ADTDVSSIQQ ALVQVGRQQL RQFITACLAR
ELIDIKPIYF RRFGAEIWRH SMQVAFLASE LASNEQRDSA FLLGLLHDVG KIAIFKMLVD
AFYQAEPGEQ PNSILFKQVM TTKSLTLSAL LARSWQLSQH FETPLTLLAN TNIKPTDGMT
LLIWKANIIS ECSMLLQVDK LPQPALAVLL AQVECSEEDF IELHQKLIQF
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