| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0002 |
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| Symbol | |
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| ID | 4277685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1428 |
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| End bp | 2528 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638132740 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_748703 |
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| Protein GI | 114561190 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000544098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTT CAATTGATAG GGACGCCCTA TTAAAGCCGT TGCAGCTAGT GTGCGGCGCG
GTAGAACGCA GACACAACTT ACCTATTTTA GCCAACTTAT TAGTTGAAGT TAGTGAGTCA
TCACTTAAGC TAACGGGCAC TGATTTAGAG GTTGAGTTGG TGGGCCAAGC GGCTATTCAT
GGTGACATTG ATATCGGTCG TACGACGGTT CCTGCTAAAA AGCTACTGGA TATTGTTAAG
TCATTACCAG AGCAGAGCGA ATTAAAGGTC GAACAACAAG ATAATAAATG GTTATTGCGT
TCAGGTCGCA GCCGTTTTTC ATTGGCAACA TTACCCGCCG AAGATTATCC CAACGTTGAA
GAGTTTCAAG CGGATATCGA ATTTAGCTTA AAGCAAGGCG TGTTGAAGTC GATTATTGAT
TCAACTCAGT TTTCAATGGC TAATCAAGAT GTCCGTTATT ATCTCAACGG TTTGTTATTT
GAAACGGAAG GCAATGTATT ACGTGCTATT GCTACCGACG GACATCGTTT AGCCTTAAGC
CATCGTACGC TTGATGTTTC ATTACCTGAA AAACAAGTTA TTGTGCCTCG TAAAGGGGTG
GTTGAAATGG CGCGCTTGCT CGACAGTGAC GACCAGGACA TTACCATTGC CATTGGTGAT
AATGCCATTA GAGCGATTAC CAGTTCTGCA GTATTTACCA GTAAGCTTGT AGATGGCCGT
TTCCCTGATT ACCGCCGCGT GTTACCTAAG GGTGGCAACA AAGTGGTTAT CGCCAGTCGC
AATCAACTAA AACAAGCGTT AACTCGTGCT TCTATCCTAT CGAATGAAAA ATTCCGTGGA
GTACGTATTC AGCTTGAAAC TGGTTTATTG AAAATTACTG CCAATAATCC TGAGCAAGAA
GAAGCAGAAG AGATTATTGA TGTTGAATAT GACTCCGACA ATCTAGAAAT TGGTTTTAAT
GTTAGTTACC TGCTTGATGT ATTAAACAAC TTAGCCAGTG ATGAAGTGCG AATTACTTTA
ATTGATGGTA ATTCCAGTGC CTTGATTGAG AACCACAAAG AAGAAGATTC TATGTATGTG
GTGATGCCAA TGCGCCTGTA A
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| Protein sequence | MKFSIDRDAL LKPLQLVCGA VERRHNLPIL ANLLVEVSES SLKLTGTDLE VELVGQAAIH
GDIDIGRTTV PAKKLLDIVK SLPEQSELKV EQQDNKWLLR SGRSRFSLAT LPAEDYPNVE
EFQADIEFSL KQGVLKSIID STQFSMANQD VRYYLNGLLF ETEGNVLRAI ATDGHRLALS
HRTLDVSLPE KQVIVPRKGV VEMARLLDSD DQDITIAIGD NAIRAITSSA VFTSKLVDGR
FPDYRRVLPK GGNKVVIASR NQLKQALTRA SILSNEKFRG VRIQLETGLL KITANNPEQE
EAEEIIDVEY DSDNLEIGFN VSYLLDVLNN LASDEVRITL IDGNSSALIE NHKEEDSMYV
VMPMRL
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