| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2825 |
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| Symbol | |
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| ID | 4270752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 3209612 |
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| End bp | 3210424 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638127587 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_743655 |
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| Protein GI | 114321972 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACC GTTATGCCGT GATGGGCAAC CCCATCGAGC ACAGCAAGTC GCCCGAGATC
CACCGGATGT TCGCCGAGCA GACCGGCCAG GCCATCGCCT ACGAGCGGAT GCGGGTGCCG
CTGGAGGGCT TCGAGCCGGC GGTGCGCGCC TTCTTCGCCA GCGGCGGGAA GGGGCTGAAC
ATCACCGTCC CCTTCAAGGA GCAGGCTTGG GTCCTGGTCG ACCGGCGCGC GCCCCGTGCC
GAGCGGGCCG GGGCAGTGAA CACCCTGCTG GCGGAGGCCG GCCGGCTGGT GGGGGACAAC
ACCGACGGCA CCGGTCTGGT GCGGGATCTG ACCGTGAACC ACGGTGCCGC GCTGCAGGGA
CGGCGGGTGC TGGTCATTGG CGCGGGCGGT GCGGTGCGCG GGGTGCTGCC GGCCCTGCTG
CCCGAGGCGC CCGGTGAGGT GGTGATCGCC AACCGCACGG TGGCGCGGGC GGAGGCCCTG
GTGGAGCTCT TCGCCGACCA GGGCCGGTTG TCCGCGGTGG GGTTCGACCG CCTGCAAGGG
CCTTTCGACG TGGTGATCAA CGGCACCTCC GCCGGGCTGG CCGGTGAGCT GCCGCCGCTG
CCCGACGATC TGCTGGCGCC GGGCGCCACC TGCTACGACA TGGTCTACGG GGATCAGCCC
ACCCCCTTCG TGCGCTGGGC CCGGGCGCAC GGCGCCGCAA TGGCGGTGGA TGGCCTGGGC
ATGCTGGTCG AGCAGGCTGC GGAGTCCTTT CTGATCTGGC GCGGGGTGCG TCCGGAGAGC
GCACCGGTGA TTGCGGCGTT GCGGCCCGAG TGA
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| Protein sequence | MTDRYAVMGN PIEHSKSPEI HRMFAEQTGQ AIAYERMRVP LEGFEPAVRA FFASGGKGLN
ITVPFKEQAW VLVDRRAPRA ERAGAVNTLL AEAGRLVGDN TDGTGLVRDL TVNHGAALQG
RRVLVIGAGG AVRGVLPALL PEAPGEVVIA NRTVARAEAL VELFADQGRL SAVGFDRLQG
PFDVVINGTS AGLAGELPPL PDDLLAPGAT CYDMVYGDQP TPFVRWARAH GAAMAVDGLG
MLVEQAAESF LIWRGVRPES APVIAALRPE
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