| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2688 |
|---|
| Symbol | |
|---|
| ID | 4269564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 3048322 |
|---|
| End bp | 3050778 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638127448 |
|---|
| Product | regulator of chromosome condensation, RCC1 |
|---|
| Protein accession | YP_743518 |
|---|
| Protein GI | 114321835 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.274478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0258848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGA TTGCCCCGCC CTTCCGCCTC CTGCACGTTG GCCTGATCCT CCTCCTCATG
GCCCTGCTCA CCGCCTGCGG GGGCGGAAGC TCCAGTACTG ATGCCCCCTC CGAGGACACC
TACCCGGTCG GCGGCACCCT GACCGGACTT GAGCAGGGCC ACACCGTCAC CCTGCAACTG
AACGGCGCCA ATGACCTGAC GCTGGACCAC ACCGCCAACG ACAATCCCTA CAGCTTTGCT
GTCAAACTGC CCCACGGCAG CGCCTACGAG GTGACCCTCC CGGCCGAACC GTCGCAACAC
CACTGCACCA TCCACAACGC CACCGGCACC GTGGATGGTG CAGTGATGAA CGTGGATGTC
GAGTGCACCG CCTTTCCCGT TCTCGCCGCG GGTGACGACC ACACGGTGGC CGTCAAGGCC
GACGGCACAC TGTGGGCCTG GGGCCGGAAT GGCTACGGTC GGCTGGGTCT GGGCGATACG
GACGACCGCG ATGTGCCGGA GCAGGTGGGT ACCGACAGCG ACTGGACGGC GGTGAGCGCG
GGCAGGGATC ACACGGTGGC CGTCAAGGCC AATGGCACCC TATGGGCCTG GGGCCGTTCG
GGCCGGATCG GCCTGGGCGA TAGCGGTGAC CGGGACGAGC CGGAGCAAGT GGGCGTCGAT
AACGACTGGA TTGCATTAAG CGCGGGGGGC AGCCATACCG TGGCCGTCAA GGCTGATGGC
ACGCTATGGG CCTGGGGCCG TAACAACGCC GGCCAACTCG GCCTGGGCGA TACCAATCAT
CACTATACGC CGACGCAGGT GGGTACCGAC ACCGACTGGG CCAAGAAGAT AAGCGCCGGC
CGACGTCACA GCCTGGCCGT CAAGGCCGAT GGCAGCCTGT GGGCTTGGGG CGACAACGAA
TACGGCCAAC TCGGGCTGGG CGATACCGAC GAACGCCATG CGCCGGAGCA GGTGGGCAGC
AACACCGACT GGGCCGCGAT AAGCGCCGGC CGACGTCACA GCCTGGCCGT CAAGGCCGAC
GGCAGCCTCT GGTCATGGGG TTACAACGAT AGTGGCCAGC TCGGCTTGGG CGACACCGCT
GACCGTAATG CACCGGAGCA GGTGGGTGCG GATACCGACT GGGACCTGGT GAGCGCGGGC
GGGGAGCATT CCCTGGCCGT CAAAGCGGAC GGCACCCTCA TGGTCTGGGG CTTGAATCAT
CTTGGTCAAC TCGGTTTAGG GGATACGGTC AGCCGCGATG CACCGGTGCC GATAGCCAGC
GGGATCGCGC TCGTTGCGGG CCGAAACCAC ACGGTGGCCG TCAATCCCGA CGGCACCCTG
CGGGCTTGGG GCGACAACGA ATACGGCCAG CTCGGCCTGG GCGTCATGCG GTACATCGTC
ACGCCGAGCC AAACCGTCAC CGGGTCCGCC TGGGCCGCGG TGAATGGCGG CTCGTTCAAC
CACAGCCTGG GGCTCAGGGA CGACGGGACC CTCTGGGCCT GGGGCCGAAA CAATTATGGC
CAGCTCGGCT TGGGCGATAC CGACGACCGC GCAACCCCGG AGCAGGTGGG CAGCCATACC
GACTGGGCTG CGGTGAATGC AGCCTCGTAC CACACTCTCG CCGTCAAGAA TGACGGCACC
CTTTGGGCGT GGGGCCGAAA CAGCTCCGGC CAACTTGGCC TGAGCGACAC GAATGACCGC
CATACACCGG AGCGGGTGGG TAGCGACACT GACTGGGCCA CAGTAAGTGT GGGGCAGTCC
CACACCTCGG CCGTCAAGCC CGATGGCACC CTCTGGGCCT GGGGCTGGAA CCATTACGGG
CAACTGGGAC TGGGCGACAC CAGTGATCGC CTCTCGCCAG AGCAGGTAGG CGGCGAGAGT
AACTGGCTCG CGGTGAGCAC GGGCTTACAC CACACGGTGG CCGTCAAGAC CGACGGCACG
CTCTGGGCCT GGGGCTGGAA TGTCCGTGGT CAGCTGGGTC TGGGCCACAC CAGCGATCGC
CACGCGCCGG TGCAGGTGGG TAGCGATACC GACTGGGCCG CAGTGAGCGC GAGCGGGTAC
CGCACCCTGG CGGTCAAGGC CGATGGCACC CTCTGGGCAT GGGGGGAGAA CAACAACGGG
CAACTGGGCC TTGGTGACAC CGACAACCGC AACACGCCTG CTCAGGTAGG CAATGATGCC
GACTGGGCGG CGGTGAGCAC GGGCTTATTC CACACGCTGG CCTTCAAAGA GGACGACACC
CTCTGGGCCT GGGGGCGGAA CCATGACGGC CAGCTTGGCC TGGGCGATAC CGACAACCGC
GATGCACCGG TGCAGGTGGG CAACGAGACT GACTGGTCCA CAGTGAGTGG CGGTGGTTAC
CACACCCTGG CCACCATGTC AGACGGGACC CTGCGGGCCT GGGGCTTGAA CACCAGCGGC
CAACTCGGCC AGCGCACGAT GTGGTTCGAC CAGCCTCAGG AGGTGCCGGG GTGGTAG
|
|---|
| Protein sequence | MRLIAPPFRL LHVGLILLLM ALLTACGGGS SSTDAPSEDT YPVGGTLTGL EQGHTVTLQL
NGANDLTLDH TANDNPYSFA VKLPHGSAYE VTLPAEPSQH HCTIHNATGT VDGAVMNVDV
ECTAFPVLAA GDDHTVAVKA DGTLWAWGRN GYGRLGLGDT DDRDVPEQVG TDSDWTAVSA
GRDHTVAVKA NGTLWAWGRS GRIGLGDSGD RDEPEQVGVD NDWIALSAGG SHTVAVKADG
TLWAWGRNNA GQLGLGDTNH HYTPTQVGTD TDWAKKISAG RRHSLAVKAD GSLWAWGDNE
YGQLGLGDTD ERHAPEQVGS NTDWAAISAG RRHSLAVKAD GSLWSWGYND SGQLGLGDTA
DRNAPEQVGA DTDWDLVSAG GEHSLAVKAD GTLMVWGLNH LGQLGLGDTV SRDAPVPIAS
GIALVAGRNH TVAVNPDGTL RAWGDNEYGQ LGLGVMRYIV TPSQTVTGSA WAAVNGGSFN
HSLGLRDDGT LWAWGRNNYG QLGLGDTDDR ATPEQVGSHT DWAAVNAASY HTLAVKNDGT
LWAWGRNSSG QLGLSDTNDR HTPERVGSDT DWATVSVGQS HTSAVKPDGT LWAWGWNHYG
QLGLGDTSDR LSPEQVGGES NWLAVSTGLH HTVAVKTDGT LWAWGWNVRG QLGLGHTSDR
HAPVQVGSDT DWAAVSASGY RTLAVKADGT LWAWGENNNG QLGLGDTDNR NTPAQVGNDA
DWAAVSTGLF HTLAFKEDDT LWAWGRNHDG QLGLGDTDNR DAPVQVGNET DWSTVSGGGY
HTLATMSDGT LRAWGLNTSG QLGQRTMWFD QPQEVPGW
|
|---|
| |