Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2670 |
Symbol | hemC |
ID | 4268803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 3022737 |
End bp | 3023663 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638127429 |
Product | porphobilinogen deaminase |
Protein accession | YP_743500 |
Protein GI | 114321817 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000000000635996 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTCAGG ACAAGCTGCG CATCGCCACC CGTCGCTCCC CGCTCGCCAT GTGGCAGGCC GAACACGTGG CCGCGGAACT CAGGCGCCAC CACCCCGGGC TTGAGGTGGA GCTGGTGCCC ATGGTCACCC GGGGGGACCG AATTCTGGAC CAGGCCCTCT CACGTATCGG CGGCAAGGGG CTGTTCATCA AGGAGCTGGA GCAGGGGATG GAGGAAGGCC GTGCCGACCT CGCGGTGCAC AGCATGAAGG ATGTCCCCTG GCGCATGCCC GACGGTTTTG CGCTGCCGGT AATCCTGGAG CGCCACGAAC CCACCGATGC CTTTGTCTCC AACCACTACC GGCGCCTGGA CGACCTGCCC GAGGGCGGGC ACCTGGGCAC TGCCAGCCTG CGGCGCCAGT GCCAGGCCAA GGCGCGCCGG CCGGATCTGC GGGTCTCCAC CCTGCGCGGC AACGTCAACA CCCGGCTGGC GAAACTGGAT GCCGGCGAGT TCGACGCCAT CATCCTTGCC GCTTCGGGGC TCAGCCGGCT TGGCTTCGAT GAGCGTATCG CCCGCCGCCT GCCCCCGGAG GAGAGCCTGC CCGCGGTAGG ACAGGGCGCG CTGGGCATCG AATGCCTGGC CGAAGACCGG CGGGTGCAGG AGCTGGTGGC CCCCCTGGAC CACGGACCCA CTCACACCCT GCTTAAGGCG GAACGGGCCA TGAACGCCCG CCTTCAGGGC AGCTGCCAAG TGCCCATCGC CGGCTACGCT TGTTACCAGG GAGAGGAGAT CTGGCTGCGC GGCCTGGTGG GCAGTCCGGA CGGCCAGGAG ATCGTGCGTG GTGAGGTCCG CGGGCCCATC GCGCAGGCCG CCGAGCTGGG CGATCGACTG GGCGGCGAAC TGCTTGAGCG CGGGGCCGCG CGCATCCTCG CGGACCTGGC CGACTGA
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Protein sequence | MPQDKLRIAT RRSPLAMWQA EHVAAELRRH HPGLEVELVP MVTRGDRILD QALSRIGGKG LFIKELEQGM EEGRADLAVH SMKDVPWRMP DGFALPVILE RHEPTDAFVS NHYRRLDDLP EGGHLGTASL RRQCQAKARR PDLRVSTLRG NVNTRLAKLD AGEFDAIILA ASGLSRLGFD ERIARRLPPE ESLPAVGQGA LGIECLAEDR RVQELVAPLD HGPTHTLLKA ERAMNARLQG SCQVPIAGYA CYQGEEIWLR GLVGSPDGQE IVRGEVRGPI AQAAELGDRL GGELLERGAA RILADLAD
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