| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2454 |
|---|
| Symbol | |
|---|
| ID | 4270195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2789078 |
|---|
| End bp | 2790343 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638127212 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_743284 |
|---|
| Protein GI | 114321601 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000486629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.341461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCG ATCCCAAGGT CATCAACGAC AAGCTGGCCA AGCGCATGTA CCAGCCCTAC
CTGGAAGCCG AGTGGGGTTT CATCAATCAC TGGTACCCGG CCCTGTTCAC CCACGAACTG
GAGGAGGGTG ATACCAAGGG CATCCAGATC TGTGGTGTGC CCATCGTTCT GCGTCGTTCC
AAGGGCAAGG TCTACGCCCT GAAGGACCAG TGCATCCACC GTGGCGTGAA GCTTTCGGCC
AAACCCATGT GCCTTACCGA TGACACCATC ACCTGCTGGT ACCACGGCTT CACCTTCGAC
CTGGCCTCCG GCAAGCTGGT CTCCATCGTG GCCGCGCCCG ATGACGAGAT CATCGGCACC
ACCGGCGTTC AGACGTTTGC CGTCGAGGAG CACAGCGGCA TGATCTTCGT GTTCGTCTGC
GACGAGGACT GGGACGAGGA CGTGCCCCCG CTGGCCGCGG ACCTGCCGCT GCGTTATCCG
GAGAACAACG AGCGTTTCCC GCACCCCTAC TGGCCCGATA CCCCCAGCGT GCTGGACGAG
CACTCCGTTG CCCTCGGTAT CCACCGCAAG GGGTACGCCA ACTGGCGACT GGCGGCCGAG
AACGGCTTTG ATCCGGGCCA CCTGCTGATC CACAAGGACA ACGCCATCGT GCACGCCCGT
GACTGGGCGC TGCCGTTGGG GGTGAAACCG GTCACCGACC AGGCCATCGC GCTGATCGAG
GACGACAACG GCCCCAAGGG CTTCCTGAAC CGGTACTACA CGGACCACTA CGAACCGATC
CTGGAGAACG AAAAGCTGGG TGTGAAGGCG CAGGGCACCG TGCCCCGCTA CTTCCGCACC
TCCATGTACC TGCCCGGCGT GCTCATGGTG GAGAACTGGC CGGAGGACCA TGTGGTGCAG
TACGAGTGGT ACGTGCCCAT TACCGACGAC ACCTATGAGT ACTGGGAGGT GCTGGTCAAG
CACTGCAAGG ACGAGCAGGA GCGCAAGGAC TTCGAGTACC GCTTTGAGAA CCTCTACAAG
CCCATGTGCC TGCACGGCTT CAACGACTGC GACCTGTTCG CCCGCGACGC CATGCAAAAC
TTCTACGCCG ATGGCACCGG CTGGAACGAG GAGCAGCTGG CCGACATGGA CGCCTCGGTG
GTGACCTGGC GCAAGATCGC CTCCCGTCAC AACCGCGGTC TGGCCCGCAA GCCCAAGGGC
GTGCCGGGCG TGCTCAAGGA CCAGAGCTAC CGGTTTGCCG AGGCCTCTGA AGGCGCCTTC
GAGTAA
|
|---|
| Protein sequence | MAADPKVIND KLAKRMYQPY LEAEWGFINH WYPALFTHEL EEGDTKGIQI CGVPIVLRRS
KGKVYALKDQ CIHRGVKLSA KPMCLTDDTI TCWYHGFTFD LASGKLVSIV AAPDDEIIGT
TGVQTFAVEE HSGMIFVFVC DEDWDEDVPP LAADLPLRYP ENNERFPHPY WPDTPSVLDE
HSVALGIHRK GYANWRLAAE NGFDPGHLLI HKDNAIVHAR DWALPLGVKP VTDQAIALIE
DDNGPKGFLN RYYTDHYEPI LENEKLGVKA QGTVPRYFRT SMYLPGVLMV ENWPEDHVVQ
YEWYVPITDD TYEYWEVLVK HCKDEQERKD FEYRFENLYK PMCLHGFNDC DLFARDAMQN
FYADGTGWNE EQLADMDASV VTWRKIASRH NRGLARKPKG VPGVLKDQSY RFAEASEGAF
E
|
|---|
| |