Gene Mlg_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2405 
Symbol 
ID4269992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2733062 
End bp2734270 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID638127163 
ProductLuxR family transcriptional regulator 
Protein accessionYP_743235 
Protein GI114321552 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00445538 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGTTCGC AATGGGTTAA GGTGAAGGGG CGGTGCCTGT CCACGCTGGA TGACCTGGTC 
GAGACCCTCT ACACCGCCGC CGCCTCGTCC CTGGGCTGGG ATGAGTTCTT GCAGGCGGTG
GTACGGGCCA GCGATTCGCG CTCGGCACGC ATGCTGATCC TGAACGCGGA CGCCGACCAG
GTGACCAGCA GTATCCAGTG GCAGATTGAC CCCGGCTATC ACCAGCGCTA CGTCGATTAT
TACGTCAATG CCTGCCCCTG GCGCCCCGAA TTGCGCCAGA AACCCCCCGG CCGCCTCTAC
TCCACCTACA CCGACTTCAG TTGCCCTCAG CCCGATTATT ATCGCACCGA GTTTTTCAAC
GACTGGGCCG GCCCACAGGA CATTCACCAT GGCGCCTGCG GCACCTTTTA TCGGGACGGC
GACCAGACCC TGCAACTGCT GGTGCAGCGC ACCCGGCGCC AGGGCCCCTA TCTGGCACAG
GACATGCGCC TACTCAACGA TCTGATCCCG CACCTGCAAC GGGCGGTGCT GATACAGCGC
CAGATCGTCG CCTGCGAAGG ACTGCACCGA TCGGTCTCGG CCGCGGCCCG GCTGGCACCG
CTGCCCTTTG TGCTGTTCAA TGAGCAGGGG CGGGTGGTGC ACCTGGAACC CACCGCCGAG
GCCCTGATCG ACAACGATCC ACGCCTGCAG CTCCACCAGG CCCGGTTGAC CCTGACCGTG
CCCTGCCAGG GGCCACACCT TTCCCACCTG ATCCGGCAGG CCATCCGTGC CGCCCTGGGC
CATACCTGGT CCGCCGCCGG TGGCCTGCTC CGGCTGGATG CCCAGGGCAA GCAGCCGCTG
AACCTGCTGG TGGCACCGTT ACCCCCGGAA GCACGCCCCT TTCACCTCTG CCCCTACCCC
GCTCACGCCG CACTCTTTCT GCATGACCCG GCACAGACCC GTCAGGTGGA CCAGGGGTTG
CTGGCGGAGC TCCATGGATT GACCGAGGCC GAGGCCCGGG TGGCGGCCGA GCTGGTGACC
GGCGCCTCGC CAGGCCAGGT GGCGGAGCTG TTGGGCGTAA CCGACCACAC CGTGCGCACC
CAGCTCAAGT CGGTCTTTCG CAAGATGCGC GTCTCCCGGC AGGCCGATCT CGTCCGGGCG
GTGCTCACCG GCCCCGCCTA CCGCTGCGCG CTCGGCCTGC CGGGTTTCTC CCTGGTACCT
CGCCACTGA
 
Protein sequence
MSSQWVKVKG RCLSTLDDLV ETLYTAAASS LGWDEFLQAV VRASDSRSAR MLILNADADQ 
VTSSIQWQID PGYHQRYVDY YVNACPWRPE LRQKPPGRLY STYTDFSCPQ PDYYRTEFFN
DWAGPQDIHH GACGTFYRDG DQTLQLLVQR TRRQGPYLAQ DMRLLNDLIP HLQRAVLIQR
QIVACEGLHR SVSAAARLAP LPFVLFNEQG RVVHLEPTAE ALIDNDPRLQ LHQARLTLTV
PCQGPHLSHL IRQAIRAALG HTWSAAGGLL RLDAQGKQPL NLLVAPLPPE ARPFHLCPYP
AHAALFLHDP AQTRQVDQGL LAELHGLTEA EARVAAELVT GASPGQVAEL LGVTDHTVRT
QLKSVFRKMR VSRQADLVRA VLTGPAYRCA LGLPGFSLVP RH