Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2405 |
Symbol | |
ID | 4269992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 2733062 |
End bp | 2734270 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638127163 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_743235 |
Protein GI | 114321552 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00445538 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGTTCGC AATGGGTTAA GGTGAAGGGG CGGTGCCTGT CCACGCTGGA TGACCTGGTC GAGACCCTCT ACACCGCCGC CGCCTCGTCC CTGGGCTGGG ATGAGTTCTT GCAGGCGGTG GTACGGGCCA GCGATTCGCG CTCGGCACGC ATGCTGATCC TGAACGCGGA CGCCGACCAG GTGACCAGCA GTATCCAGTG GCAGATTGAC CCCGGCTATC ACCAGCGCTA CGTCGATTAT TACGTCAATG CCTGCCCCTG GCGCCCCGAA TTGCGCCAGA AACCCCCCGG CCGCCTCTAC TCCACCTACA CCGACTTCAG TTGCCCTCAG CCCGATTATT ATCGCACCGA GTTTTTCAAC GACTGGGCCG GCCCACAGGA CATTCACCAT GGCGCCTGCG GCACCTTTTA TCGGGACGGC GACCAGACCC TGCAACTGCT GGTGCAGCGC ACCCGGCGCC AGGGCCCCTA TCTGGCACAG GACATGCGCC TACTCAACGA TCTGATCCCG CACCTGCAAC GGGCGGTGCT GATACAGCGC CAGATCGTCG CCTGCGAAGG ACTGCACCGA TCGGTCTCGG CCGCGGCCCG GCTGGCACCG CTGCCCTTTG TGCTGTTCAA TGAGCAGGGG CGGGTGGTGC ACCTGGAACC CACCGCCGAG GCCCTGATCG ACAACGATCC ACGCCTGCAG CTCCACCAGG CCCGGTTGAC CCTGACCGTG CCCTGCCAGG GGCCACACCT TTCCCACCTG ATCCGGCAGG CCATCCGTGC CGCCCTGGGC CATACCTGGT CCGCCGCCGG TGGCCTGCTC CGGCTGGATG CCCAGGGCAA GCAGCCGCTG AACCTGCTGG TGGCACCGTT ACCCCCGGAA GCACGCCCCT TTCACCTCTG CCCCTACCCC GCTCACGCCG CACTCTTTCT GCATGACCCG GCACAGACCC GTCAGGTGGA CCAGGGGTTG CTGGCGGAGC TCCATGGATT GACCGAGGCC GAGGCCCGGG TGGCGGCCGA GCTGGTGACC GGCGCCTCGC CAGGCCAGGT GGCGGAGCTG TTGGGCGTAA CCGACCACAC CGTGCGCACC CAGCTCAAGT CGGTCTTTCG CAAGATGCGC GTCTCCCGGC AGGCCGATCT CGTCCGGGCG GTGCTCACCG GCCCCGCCTA CCGCTGCGCG CTCGGCCTGC CGGGTTTCTC CCTGGTACCT CGCCACTGA
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Protein sequence | MSSQWVKVKG RCLSTLDDLV ETLYTAAASS LGWDEFLQAV VRASDSRSAR MLILNADADQ VTSSIQWQID PGYHQRYVDY YVNACPWRPE LRQKPPGRLY STYTDFSCPQ PDYYRTEFFN DWAGPQDIHH GACGTFYRDG DQTLQLLVQR TRRQGPYLAQ DMRLLNDLIP HLQRAVLIQR QIVACEGLHR SVSAAARLAP LPFVLFNEQG RVVHLEPTAE ALIDNDPRLQ LHQARLTLTV PCQGPHLSHL IRQAIRAALG HTWSAAGGLL RLDAQGKQPL NLLVAPLPPE ARPFHLCPYP AHAALFLHDP AQTRQVDQGL LAELHGLTEA EARVAAELVT GASPGQVAEL LGVTDHTVRT QLKSVFRKMR VSRQADLVRA VLTGPAYRCA LGLPGFSLVP RH
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