| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2401 |
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| Symbol | |
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| ID | 4269988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2728254 |
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| End bp | 2730275 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638127159 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_743231 |
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| Protein GI | 114321548 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.539176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000473161 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCAGC TGATAGCGGG GGCGCGGCGC TGGCTCGGCT GCGGGGCCGG CGTGCTGCTG
GTGGGGCTGC TGCTCTGCGG GCCGGTACTG GCCGAAGAGG ACGAGGGGAT CACCCTCAAC
TTCCAGGATG CGGACCTGCG CGAGGTGGTG GCACTGGTCT CCCAGGAGAC CGGGGTCAAC
TTCATCGTCG ACCCGCGGGT GCGGGGCGAT GTCACCATCG TCTCGCAGAC CCCGGTGGAC
GCTGACGGCC TCTATCAGGT CTTCCTCTCG GCGCTCAAGA TCCACGGCTT TGCCGCCGTG
CCCACCCCCG AGGCGGTGCG CATCATCCCC CGTGCCCAGG CCCGCCAGGA CCGTATCCCC
AGTGATGGTG ATACCACCCG AAGCCTGGGG GACCAGGCGG TCACCCGGGT CATCCGGGTG
GACCACGTCA ACGCCGCGGA GCTGGTGCCG GTGCTGCGCC CGCTGGTGCC CCAGGACGGC
CACCTGGCCG CCTACAGCCC GGCCAACAGT CTCATCATCT CCGACACCGC CGCCAACGTG
GACCGGCTCG AGGTGTTGAT CGGCCGGGTG GACCGGGACA CCGAGGGCGA GATCGAGGTT
ATCCAGCTCG AGCACGCCGC CGCCAGCGAA GTGGTGCGCA TGGTACGCGA GCTGGAGGAC
GAGGAGCGCG AGGGGCGCCG CCTGCGGGTG GTGGCCGATG AGCGGGCCAA CAGTGTGATG
ATCGCCGGCG ACCGCCAGCG CCGCCTGCTG GTGCGCGCCC TGATCGGCCA GATTGACAGT
GAGGTGGCCG CCGAGGGCAC GGCACAGGTG GTCTATCTTC GCTTTGCCGA TGCCGAGGAG
CTGGTGCCGG TACTGGAGGG CATCGGCACC AGCCTGTTGG AGAGTCGGGG GGGCAACGAC
GCCGGTGGCC AGGGGCTGGA CATCCGCGCC CATTCCAGCA CCAACGCCCT GGTCATGAAC
GGGCCGGCGG ACGTGCTGCG CTCGCTGCGC TCGGTGCTGA ACCGGCTCGA TATCCGTCGC
GCCCAGGTGC TGGTGGAGGC GGTGATCGCC GAGGTCTCCC AGGACCGGGT GGAAGAGCTG
GGGGTGCAAT GGGGGGTGCT GTCCGAGGAC CGCGGCGTCG GGCTGATCAA CTTCGGAGGG
GCCGCCGGCG CCGGTGGCGG TATCGCCGAC GTCATCCGGG CTGCCGGGGC CATTTCCGAC
GGCAGCACCG CCGACCTGCC GCAGGTCGGC GACGGCGCCG CCATCGGCGT CGGCGACCTG
CGGGGCTCGA CCCAGGTGGC GGCGCTGATC CGCGCCCTGT CCGGTGACAG CGCCAGCAAC
ATCCTCTCCA CCCCCTCGCT GATGACCATG GACAACGAGG AGGCCGAGAT CGTCGTCGGC
CAGAATGTCC CCTTCATCAC CGGCCGGGCC ATTGAGGACT CCGGCCAGGC CTTCAGCAGC
ATCCAGCGTC AGGACGTGGG CGTGCAACTG CGCATCCGGC CGCAGATCAA CGAGGGCGAC
ACCCTGAAGC TGGAGATCGA ACAGGAGGTC TCCAGCGTCA GCGGCGGCAT TCAGGGGGCG
GCGGACCTGG TCACCGACTT GCGCAGCGTG CGGACCAGCG TGATGGTGGA GAACGGGCAG
ATGGTGGTCC TGGGCGGGCT GATCGACGAC CAGCTACGCA CCCGCAGCCA AGCGGTACCG
CTGTTGGGCA ACCTGCCGGG TCTGGGGCGG TTGTTCCGCT ACGACCGCAG CCAGGTTGAG
AAGCGCAATC TGATGGTCTT CCTGCGCCCG GTGATCATCC GCGATACCGC CGCGCAGGAG
CGCGCGACCG CCGAGCCCTA CAACCGCATG CGCGCCATGC AGCAGCGCTT TCGCGACGAG
GGCGTGCCGC TGATGCCCGA TGATGCCGCG CCGGTGCTGG CCGAATCGGA GCAGTTCATG
TCGTTGCCGC CCGCCTACGA CGACCGGCCG GAAAGCACCG GCCCCACCGG CCGTTCGCGG
GGCGCCCTGC CGCCCCCCTC GCGCCAGGGT TTTCTGGACT GA
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| Protein sequence | MIQLIAGARR WLGCGAGVLL VGLLLCGPVL AEEDEGITLN FQDADLREVV ALVSQETGVN
FIVDPRVRGD VTIVSQTPVD ADGLYQVFLS ALKIHGFAAV PTPEAVRIIP RAQARQDRIP
SDGDTTRSLG DQAVTRVIRV DHVNAAELVP VLRPLVPQDG HLAAYSPANS LIISDTAANV
DRLEVLIGRV DRDTEGEIEV IQLEHAAASE VVRMVRELED EEREGRRLRV VADERANSVM
IAGDRQRRLL VRALIGQIDS EVAAEGTAQV VYLRFADAEE LVPVLEGIGT SLLESRGGND
AGGQGLDIRA HSSTNALVMN GPADVLRSLR SVLNRLDIRR AQVLVEAVIA EVSQDRVEEL
GVQWGVLSED RGVGLINFGG AAGAGGGIAD VIRAAGAISD GSTADLPQVG DGAAIGVGDL
RGSTQVAALI RALSGDSASN ILSTPSLMTM DNEEAEIVVG QNVPFITGRA IEDSGQAFSS
IQRQDVGVQL RIRPQINEGD TLKLEIEQEV SSVSGGIQGA ADLVTDLRSV RTSVMVENGQ
MVVLGGLIDD QLRTRSQAVP LLGNLPGLGR LFRYDRSQVE KRNLMVFLRP VIIRDTAAQE
RATAEPYNRM RAMQQRFRDE GVPLMPDDAA PVLAESEQFM SLPPAYDDRP ESTGPTGRSR
GALPPPSRQG FLD
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