| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2388 |
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| Symbol | |
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| ID | 4269385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2712763 |
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| End bp | 2713401 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638127146 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_743218 |
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| Protein GI | 114321535 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000000292779 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCTG ACCGGTCGCG CGGTTTCACC CTCCTGGAGC TGCTGGTGGC CATGGCGGTC
TTCTCCCTGC TGGCCGCCAT GGCCTACGGC GGCCTCACCT CGGTGCTGGA CGCCCGGGCG
CACACCGACC GGGCCGCGGA GCGACTGGAT GAGATGCAGT TGGCCTTCGC CATGCTGCAG
CGGGATCTGC ACCAGGTGGT GGACCGGCCC CGGCGCGATG CCTACGGCGA CCGCCGCCCC
GGGCTGATGC TCGACGACCT GCGCCTGCCC CCGCGGCTGG AACTGGTGAG CGCTGGCGCG
CGCAGTCGCG GCGTGCGCTC GGAGCTGCGA CGGGTGGGTT GGGAGCTGGA GGACGGCGTG
CTCTACCGGC TGCTCTGGCC CACCGTGGAC GGCGGCATGG ATGAGCCGCA AAGCCGGGTG
CCCATGCTGG GGGAGGTGGC CGGCAACACC GTGGAGGTAC TCGCCTTCGT CTTCCACTAC
CATGGCCTGG ACGGGGAGCG GACCACCAGC CGGGCCTGGC CCCCACCGGA GCAGCCCAAT
GCGGACCTGC CCCTCGCCGT CGAGATTGAA CTGGAAGCGG AGCACACCGG GGCGGTGACC
CGGCTTTTCG CCCTCCCGCG CAAGGAGAAC GACCGATGA
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| Protein sequence | MASDRSRGFT LLELLVAMAV FSLLAAMAYG GLTSVLDARA HTDRAAERLD EMQLAFAMLQ
RDLHQVVDRP RRDAYGDRRP GLMLDDLRLP PRLELVSAGA RSRGVRSELR RVGWELEDGV
LYRLLWPTVD GGMDEPQSRV PMLGEVAGNT VEVLAFVFHY HGLDGERTTS RAWPPPEQPN
ADLPLAVEIE LEAEHTGAVT RLFALPRKEN DR
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