| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2287 |
|---|
| Symbol | clpX |
|---|
| ID | 4268384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2595034 |
|---|
| End bp | 2596311 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638127046 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_743119 |
|---|
| Protein GI | 114321436 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.16116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.74961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA AAGACAACGG CAGAGACGAC GGCGGCAAGC TCCTTTACTG TTCTTTCTGC
GGGAAGAGCC AGCACGAGGT CCGCAAGCTG ATCGCCGGGC CCTCGGTGTT TGTGTGTGAC
GAGTGCGTCG AGCTCTGCAA CGACATTATC CGCGAGGAGC TGCAGGAGCA GTCCAGCTCC
GCGGGGGCGG GCCTGCCGCG GCCTCACGAG ATCAACCAGG TGCTGGATGA GTTCGTGGTG
GGGCAGGAGC ACGCCAAGAA GGTGCTCTCG GTGGCCGTCT ACAACCACTA CAAACGCCTC
GAGGCGGGCA GCCGCAAGGA CGAGGTGGAG CTGTCCAAGA GCAATATCCT GCTCATCGGC
CCCACCGGCT CGGGCAAGAC GCTGCTGGCC GAGACGCTGG CGCGCATGCT CAACGTGCCC
TTCACCATTG CCGACGCCAC CACCCTGACC GAGGCGGGGT ACGTCGGTGA GGACGTGGAG
AACATCATCC AGAAGCTGCT GCAAAAGTGC GATTACGATG TGGAGAAGGC CCAGCAGGGC
ATCGTCTACA TCGACGAGAT CGACAAGGTC TCGCGCAAGG CGGACAACCC CTCCATCACC
CGCGACGTCT CGGGCGAGGG GGTGCAGCAG GCGCTGCTCA AGCTGATCGA GGGCACCACG
GCCTCGGTGC CGCCCCAGGG CGGCCGCAAG CACCCGCAGC AGGAGTTCCT GCAGGTGGAC
ACCGGCGGCA TCCTGTTCAT CTGCGGCGGC GCCTTCGCCG GCCTGGACAA GGTCATCCAG
GACCGTTCCG AGAAGGGCGG TATCGGCTTC TCCGCCGAGA TCAAGTCCAA GGACGAGAAG
CGCTCGGTGG GTGAGACCCT GCAGGACGTG GAGCCCGAGG ATCTGGTCAA GTACGGCCTG
ATCCCGGAGT TTGTCGGCCG CCTGCCGGTG GTCGCCACCC TGGAGGAGCT GGACGAGCAG
GCCCTGGTGG AGATCCTCTC CGCGCCCAAG AACGCCCTGG TCAAGCAGTA CCAGAAGCTG
TTCGAGATGG AGGGTGTGGA GCTGGAGTTC CGCGAGGACG CCCTGCGCGC CGTGGCCCGC
AAGGCCATGG ACCGCAAGAC CGGTGCCCGC GGCCTGCGCA CCATCCTCGA GCACGTGCTG
CTGGACACCA TGTACGATCT GCCCTCCATG GAGAACGTTG AAAAGGTGGT GGTGGACGAC
GCCGTGATCC GCGGCGAGAC GCGGCCCTAC ATCATCTACG GCAATCAGGA GCAGTCGCGG
GCGGCTTCCT CCGACTGA
|
|---|
| Protein sequence | MTDKDNGRDD GGKLLYCSFC GKSQHEVRKL IAGPSVFVCD ECVELCNDII REELQEQSSS
AGAGLPRPHE INQVLDEFVV GQEHAKKVLS VAVYNHYKRL EAGSRKDEVE LSKSNILLIG
PTGSGKTLLA ETLARMLNVP FTIADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQQG
IVYIDEIDKV SRKADNPSIT RDVSGEGVQQ ALLKLIEGTT ASVPPQGGRK HPQQEFLQVD
TGGILFICGG AFAGLDKVIQ DRSEKGGIGF SAEIKSKDEK RSVGETLQDV EPEDLVKYGL
IPEFVGRLPV VATLEELDEQ ALVEILSAPK NALVKQYQKL FEMEGVELEF REDALRAVAR
KAMDRKTGAR GLRTILEHVL LDTMYDLPSM ENVEKVVVDD AVIRGETRPY IIYGNQEQSR
AASSD
|
|---|
| |