| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2230 |
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| Symbol | |
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| ID | 4269445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2532778 |
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| End bp | 2534295 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638126986 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_743062 |
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| Protein GI | 114321379 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAACGG TCATGAAACA ATCGCTGCAA CTTCGACTCG GGCAGCAACT CACTATGACG
CCACAGCTGC AACAGGCCAT CCGCCTGCTG CAGCTCTCCA CCCTGGATCT GCAGATGGAG
ATCCAGCAGC AGCTCGAGTC CAACGTCATG CTGGAACTCG CCGAAGAGGA CCAGCAGGAG
ACCGAACAGC GCACCGAAGA GGGCGAGACC CAGGACACGG AGGGCGAGCG CGGGGACGAG
GCCAGCACCG AGGAGGCCAC CGAGGCCGGG ACCGCGGGCG AGGAGACCGC CGCCCAGGAG
CAGGCCGACA TCCCCGAGGA CCTGCCGCTG GACTCCAATT GGGATGACAT CTACGACGGC
AGCACCCCCT GGAGCCAGCC GGACAGCGAG GACGAGGACC GCGACCCCTA CGCCAACCGC
TCCGGTGGCG GTGAAACCCT GCACGACCAC CTGACCTGGC AGGCGGAGCT CACCCCCTTC
ACCGATCGGG ACGCGGCCAT CGCACAGGTC ATCATCGACT CCGTGCGCGA CGACGGCTAC
CTGGGCGCCG GCATCGAGGA GTTGATCTCC GCCCTGCCGG CGGAGTGGGC CGTGGAGCCC
GATGAGGTCG AGGCGGTGCT CCGGCGCATC CAGCACTTCG ACCCGGTGGG CGTGGCCGCC
CGCGATCCGC GTGAGGCGCT GCTCATCCAG CTCGAGCAGC TGCCGCCGGA CACCCCACTG
CTGCCCGAGG CCCGGCGCCT GGTGGATCTG CACCTGGACA TGCTGGTACA GCGCCAGTAC
GCCCAACTCT GTCGGCGCAT GAAGCTCAAT CAGGACCAGC TTCGCGAGGT CCTGGGCCTG
ATCCAGACCC TCGATCCGCG GCCGGGCTCG CAAATCGGTG GCGACGAGAC CCAGTACGTG
GTCCCCGACG TGGTGGTCCG GCGCAGCGAC GGCCGCTGGC AGGTGGAGCT CAATCCCGCG
ACCGCCCCCC GGCTGCGGGT CAACAGCTAT TACGCCAGCC TGATCAAACG CGCCGACAAC
AGCAGCGACA ACACCACCCT GCGCAACCAC CTGCAGGAGG CGCGCTGGTT CATCAAGAGC
CTGCTTAGCC GCAACGACAC CCTGCTCAAG GTCGCCCGCT GCATCGTCGA GCGCCAGCAG
GGCTACTTCG ACCACGGCGA AGAGGCCATG CAGCCGTTGG TCCTGCGCGA GGTGGCCGAG
GCGGTGGACA TGCACGAGTC CACCATCTCC CGGATCACCA CCCGCAAGTA CATGCACACC
CCGCGGGGCA CCCTGGAGTT CAAGTACTTC TTCTCCAGCC ATGTGCAGAC GGTGGACGGC
GGCGAGTGCT CCGCCACCGC CATCCGTGCC CGCATCCGGC GTCTGATCGC CGATGAGAAC
CCCACCAAAC CACTCAGTGA CAGTCGTATT GCCAATATCC TCCAGGAGGA GGGCATAAAC
GTGGCAAGAC GGACCGTAGC CAAGTATCGT GAGGCTATGG CCATCGCGTC CTCGTCAGAG
CGCAAGCGAC TGGCCTGA
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| Protein sequence | MATVMKQSLQ LRLGQQLTMT PQLQQAIRLL QLSTLDLQME IQQQLESNVM LELAEEDQQE
TEQRTEEGET QDTEGERGDE ASTEEATEAG TAGEETAAQE QADIPEDLPL DSNWDDIYDG
STPWSQPDSE DEDRDPYANR SGGGETLHDH LTWQAELTPF TDRDAAIAQV IIDSVRDDGY
LGAGIEELIS ALPAEWAVEP DEVEAVLRRI QHFDPVGVAA RDPREALLIQ LEQLPPDTPL
LPEARRLVDL HLDMLVQRQY AQLCRRMKLN QDQLREVLGL IQTLDPRPGS QIGGDETQYV
VPDVVVRRSD GRWQVELNPA TAPRLRVNSY YASLIKRADN SSDNTTLRNH LQEARWFIKS
LLSRNDTLLK VARCIVERQQ GYFDHGEEAM QPLVLREVAE AVDMHESTIS RITTRKYMHT
PRGTLEFKYF FSSHVQTVDG GECSATAIRA RIRRLIADEN PTKPLSDSRI ANILQEEGIN
VARRTVAKYR EAMAIASSSE RKRLA
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