| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2186 |
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| Symbol | lpxC |
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| ID | 4270965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2490801 |
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| End bp | 2491718 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638126942 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_743018 |
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| Protein GI | 114321335 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00133982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.348501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTC AGCGCACGTT AAAGAACAGT ATCCGCGCCA CTGGCGTGGG CTTGCACACC
GGCGAGAAGG TGTACCTCAC CCTCCGACCG GCGCCGGCCA ACACCGGTAT TATCTTCCGA
CGGGTGGATC TGGACCCGCC GGTGGATATC CCCGGCCATG CGCTGAACGT CGGGGATACC
CGACTCTCCA CCTGCCTCTC CCAGGGGGAG GCGCGGGTCT ACACGGTGGA GCACCTGCTC
TCCGCCATGG CCGGCCTGGG GATCGACAAC GCCTTCGTCG AGGTGAGCGC CCCGGAGGTG
CCGATCATGG ACGGCAGTTC GGGGCCGTTC GTGTTCCTGA TCCGTTCTGC GGGCATCGAG
GAACAGAATG CGCTGAAGCG GTTCATCCGG ATCCGCAAGC CGGTGCGGGT GGAGGAGGAC
GACAAGTGGG CCGCCTTCGA GCCGTTCAAC GGGTTCAAGG TGGGCTACAC GCTGCATTTC
GACCACCCGG TGTTCACCGA GCAAAACGGC TTCGCGGAAT TGGATTTCTC CAGCACCTCC
TTCGTCAAGG AGGTGAGCCG TGCGCGCACG TTCGGCTTCA TGCGCGACAT CGAGATGCTG
CGGGCCAACC GGCTGGCGCT GGGGGGCAGC CTGGACAACG CCATCCTGGT GGACGACTAC
CGCATCCTCA ACGAAGACGG GCTGCGCTAT CAGGATGAGT TCGTCAAGCA CAAGATCCTG
GATGCCATCG GCGATCTCTA CCTGCTGGGC CACAGCCTGA TCGGGGCCTT CAAGGGCCAT
AAGTCCGGGC ACTCGCTGAA CAACAAGCTG TTGCGGGCGC TGCTGGCGCA GGAGGACGCC
TGGGAGGAGG TCACCTTCGA TCAGGCCTCC GACTCGCCGA TCGCCTACGA TCGACCGGGG
CTGGCGGTGG CCGGCTGA
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| Protein sequence | MIRQRTLKNS IRATGVGLHT GEKVYLTLRP APANTGIIFR RVDLDPPVDI PGHALNVGDT
RLSTCLSQGE ARVYTVEHLL SAMAGLGIDN AFVEVSAPEV PIMDGSSGPF VFLIRSAGIE
EQNALKRFIR IRKPVRVEED DKWAAFEPFN GFKVGYTLHF DHPVFTEQNG FAELDFSSTS
FVKEVSRART FGFMRDIEML RANRLALGGS LDNAILVDDY RILNEDGLRY QDEFVKHKIL
DAIGDLYLLG HSLIGAFKGH KSGHSLNNKL LRALLAQEDA WEEVTFDQAS DSPIAYDRPG
LAVAG
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